RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 UPK1AO00322 258 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PIP5K1BO14986 540 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 HDAC3O15379 428 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 HNRNPRO43390 633 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 ZNF354AO60765 605 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 ICOSLGO75144 302 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PEX11AO75192 247 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PRKRAO75569 313 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 NKX2-2O95096 273 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 TGDSO95455 350 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 CLDN14O95500 239 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 IL33O95760 270 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 EPPINO95925 133 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 AK1P00568 194 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 CCL3P10147 92 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 LBPP18428 481 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 SDC1P18827 310 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 FKBP2P26885 142 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 ACVR2AP27037 513 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 IL12BP29460 328 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 CHRNB4P30926 498 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 GPC1P35052 558 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 TIMP3P35625 211 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PIGAP37287 484 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 MAP3K8P41279 467 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 MASP1P48740 699 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PCYT1AP49585 367 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 ANXA11P50995 505 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 NCBP2P52298 156 aaKnown RBP eCLIP5.86□□□□□ -1.47
USP54-202ENST00000413442 CLNS1AP54105 237 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 DIO3P55073 304 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 KCNK10P57789 538 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PLCXD2Q0VAA5 305 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 CHI3L2Q15782 390 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 ZNF630Q2M218 657 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 RNFT1Q5M7Z0 435 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 TCHHL1Q5QJ38 904 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 CPTPQ5TA50 214 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 ANXA8L1Q5VT79 327 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 SP5Q6BEB4 398 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 CLEC6AQ6EIG7 209 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 VASNQ6EMK4 673 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 AAGABQ6PD74 315 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 HDXQ7Z353 690 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 MTERF4Q7Z6M4 381 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 FJX1Q86VR8 437 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PLCZ1Q86YW0 608 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 GOLGA6L1Q8N7Z2 621 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 FNDC5Q8NAU1 212 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 GLB1L3Q8NCI6 653 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 OR10G3Q8NGC4 313 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 OR8J2Q8NGG1 315 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 OR52N2Q8NGI0 321 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 LILRB4Q8NHJ6 448 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 FAM110BQ8TC76 370 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 ZPLD1Q8TCW7 415 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 RNF138Q8WVD3 245 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 HGDQ93099 445 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 TESCQ96BS2 214 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 TUBGCP3Q96CW5 907 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 OMA1Q96E52 524 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 RILPQ96NA2 401 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 UCN2Q96RP3 112 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 HBEGFQ99075 208 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 HES7Q9BYE0 225 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 DEFB127Q9H1M4 99 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 UBQLN3Q9H347 655 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 ACBD3Q9H3P7 528 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 CENPHQ9H3R5 247 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 GLIPR2Q9H4G4 154 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 LIN28AQ9H9Z2 209 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 CALHM2Q9HA72 323 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 FOLH1BQ9HBA9 442 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 PROK2Q9HC23 129 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 TMBIM4Q9HC24 238 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 DUSP22Q9NRW4 184 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 FAM120CQ9NX05 1096 aaKnown RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 PAQR5Q9NXK6 330 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 TUBA8Q9NY65 449 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 ZNF629Q9UEG4 869 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 FOXD3Q9UJU5 478 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 CBLCQ9ULV8 474 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 OR10H1Q9Y4A9 318 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 POLR3HQ9Y535 204 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 SVILO95425 2214 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 NCOA6Q14686 2063 aaPredicted RBP5.86□□□□□ -1.47
USP54-202ENST00000413442 ARHGAP21Q5T5U3 1957 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 A0A087WZY1 265 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 IGLV3-32A0A0A0MS00 114 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 MYOCOSA0A1B0GUC4 107 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 PRSS51A0A1B0GVH4 220 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 A0A1W2PQD3 144 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 CD8B2A6NJW9 211 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 HSPB2A8KAH6 182 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 RNASET2O00584 256 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 SNPHO15079 494 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 SCAMP2O15127 329 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 CDC40O60508 579 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP54-202ENST00000413442 GOSR1O95249 250 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 JUNP05412 331 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms