RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 OR51I1Q9H343 314 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 CLMPQ9H6B4 373 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 SPHK1Q9NYA1 384 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 MYOFQ9NZM1 2061 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 LINGO3P0C6S8 592 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ST3GAL3Q11203 375 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 SNTA1Q13424 505 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 TRA2AQ13595 282 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYNE1-211ENST00000413186 IHHQ14623 411 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 CYBRD1Q53TN4 286 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 KIAA1614Q5VZ46 1190 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 RNF44Q7L0R7 432 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF440Q8IYI8 595 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 OR2A1Q8NGT9 310 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 TMEM234Q8WY98 164 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 MACROD1Q9BQ69 325 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ULBP3Q9BZM4 244 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 LYRM4Q9HD34 91 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 PADI1Q9ULC6 663 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 RNF215Q9Y6U7 377 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 R4GN57 208 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 U3KQV3 271 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 SPAG17Q6Q759 2223 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 IQCMA0A1B0GVH7 501 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 hCG_2039718K7EN88 272 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 TRMUO75648 421 aaKnown RBP8.04□□□□□ -1.12
SYNE1-211ENST00000413186 DNAJB5O75953 348 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 CAPN3P20807 821 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 SDHBP21912 280 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 CXCR1P25024 350 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 KDELR2P33947 212 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ALDH3A2P51648 485 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 MVKQ03426 396 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ATP6AP1Q15904 470 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 OGFRL1Q5TC84 451 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF547Q8IVP9 402 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 KBTBD2Q8IY47 623 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 CLECL1Q8IZS7 167 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ANKFN1Q8N957 763 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF570Q96NI8 536 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 MAGIXQ9H6Y5 334 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 PTGFRNQ9P2B2 879 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 TESMINQ9Y4I5 508 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 SLC22A7Q9Y694 548 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 VWA8A3KMH1 1905 aa8.04□□□□□ -1.12
SYNE1-211ENST00000413186 A0A1B0GX78 115 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 RAB19A4D1S5 217 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 EFCAB10A6NFE3 127 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 CBY3A6NI87 242 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 GABRR3A8MPY1 467 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 C17orf105B2RV13 164 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 UBFD1O14562 309 aaKnown RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 DENRO43583 198 aaKnown RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 SIGLEC6O43699 453 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 IFNA7P01567 189 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 IGHV4-34P06331 123 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 H1F0P07305 194 aaKnown RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ICAM2P13598 275 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 CPMP14384 443 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 DCAF7P61962 342 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 CLPPQ16740 277 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 GAB4Q2WGN9 574 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OR51Q1Q8NH59 317 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OR4C6Q8NH72 309 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 MOSPD2Q8NHP6 518 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 CHTF18Q8WVB6 975 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 CLDN23Q96B33 292 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF578Q96N58 590 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 SLC6A16Q9GZN6 736 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 C20orf27Q9GZN8 174 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 TCEAL2Q9H3H9 227 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 TMEM138Q9NPI0 162 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 NRG2O14511 850 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 KRT33AO76009 404 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF432O94892 652 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ANGPTL1O95841 491 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 GP1BBP13224 206 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 MC1RQ01726 317 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 PLGLB1Q02325 96 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 CEACAM7Q14002 265 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 NUP54Q7Z3B4 507 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 FRMD1Q8N878 549 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OR8J2Q8NGG1 315 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 POC1BQ8TC44 478 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 PROKR1Q8TCW9 393 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 PRR11Q96HE9 360 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 MAELQ96JY0 434 aaKnown RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 SORBS1Q9BX66 1292 aaKnown RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 WDR12Q9GZL7 423 aaKnown RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ARMC1Q9NVT9 282 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF624Q9P2J8 865 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 KCND3Q9UK17 655 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 A0A1B0GTQ1 180 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 LRIT2A6NDA9 550 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ANTXRLA6NF34 631 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 CLCA1A8K7I4 914 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 C9P02748 559 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ST6GAL1P15907 406 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 FPR1P21462 350 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 FASLGP48023 281 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms