RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 NTMT1Q9BV86 223 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PRODH2Q9UF12 536 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DKKL1Q9UK85 242 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PSME2Q9UL46 239 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SLC12A4Q9UP95 1085 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GPR55Q9Y2T6 319 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FRG2CA6NGY1 282 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OR6C70A6NIJ9 312 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TO15178 435 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 HCRTR2O43614 444 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZIC3O60481 467 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CRHP06850 196 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PCSK2P16519 638 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TYK2P29597 1187 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ALDH9A1P49189 494 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 MRPS35P82673 323 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CAV1Q03135 178 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TRAF3Q13114 568 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 LTB4RQ15722 352 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 UAP1Q16222 522 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 C10orf62Q5T681 223 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OR2A2Q6IF42 318 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 VWA1Q6PCB0 445 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 BTLAQ7Z6A9 289 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 MILR1Q7Z6M3 343 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 FBXO25Q8TCJ0 367 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 DTNBP1Q96EV8 351 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PERPQ96FX8 193 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PGM2Q96G03 612 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 NSUN5Q96P11 429 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ADOQ96SZ5 270 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 LRRC1Q9BTT6 524 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 VPS11Q9H270 941 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ELOVL6Q9H5J4 265 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZBTB26Q9HCK0 441 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 FARSBQ9NSD9 589 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 WIF1Q9Y5W5 379 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF780BQ9Y6R6 833 aa12.89□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TRIM64BA6NI03 449 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SLC22A20A6NK97 555 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ABCB7O75027 752 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CRYGSP22914 178 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 DPP4P27487 766 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PCYT1AP49585 367 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 GALNT1Q10472 559 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TRADDQ15628 312 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 BCL2A1Q16548 175 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TECRLQ5HYJ1 363 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF474Q6S9Z5 364 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PLD6Q8N2A8 252 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 LRRN4CLQ8ND94 238 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OR4F6Q8NGB9 312 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CNRIP1Q96F85 164 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SLC35A4Q96G79 324 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF681Q96N22 645 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ANKRA2Q9H9E1 313 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PCTPQ9UKL6 214 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 UTP11Q9Y3A2 253 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 JMJD1CQ15652 2540 aa12.88□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TSPAN2O60636 221 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 NME6O75414 186 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PDYNP01213 254 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ALDOAP04075 364 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CT45A8P0DMV1 189 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CT45A9P0DMV2 189 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PEPDP12955 493 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 POU2F1P14859 743 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 GRK2P25098 689 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 KRT20P35900 424 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 UGT2B10P36537 528 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 KIR2DL2P43627 348 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 KCNJ5P48544 419 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SERPINB8P50452 374 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CORO7P57737 925 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 B3GALT5-AS1P59052 145 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SIRPAP78324 504 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 GUCY2DQ02846 1103 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 C2orf54Q08AI8 447 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 EFR3AQ14156 821 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CT45A2Q5DJT8 189 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 LARP4Q71RC2 724 aaKnown RBP eCLIP12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 RPS27LQ71UM5 84 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF550Q7Z398 422 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CCDC116Q8IYX3 515 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SELENOMQ8WWX9 145 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 FIG4Q92562 907 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZC3HAV1LQ96H79 300 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SLC39A3Q9BRY0 314 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 FAIM2Q9BWQ8 316 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ELOVL5Q9NYP7 299 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 HEY2Q9UBP5 337 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 UTS2RQ9UKP6 389 aa12.87□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TMCO1Q9UM00 188 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms