RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PARD6BQ9BYG5 372 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 RBM38Q9H0Z9 239 aaKnown RBP4.32□□□□□ -1.72
LSM5-205ENST00000409952 RHOJQ9H4E5 214 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 DCTPP1Q9H773 170 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 SLC25A19Q9HC21 320 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ZNF160Q9HCG1 818 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 LZTFL1Q9NQ48 299 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ECHDC1Q9NTX5 307 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 HIF1ANQ9NWT6 349 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 C2orf42Q9NWW7 574 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 KLHL28Q9NXS3 571 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 KLRF1Q9NZS2 232 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 GCNT4Q9P109 453 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 POU2F3Q9UKI9 436 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ZHX2Q9Y6X8 837 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 CGNL1Q0VF96 1302 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 PPIAL4EA0A075B759 164 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 A0A1W2PNV4 684 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 C9JVG2 144 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 LMO7DNF2Z398 122 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 NVLO15381 856 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 SORBS2O94875 1100 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 CSTAP01040 98 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 IGHV4-39P01824 125 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 FAM157CP0CG43 387 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 PPIAL4FP0DN26 164 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 AADACP22760 399 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 UCP1P25874 307 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 ATP5C1P36542 298 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 HSD17B2P37059 387 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 C21orf59P57076 290 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 NOP14P78316 857 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 POU3F1Q03052 451 aaPredicted RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 MERTKQ12866 999 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 FAM76BQ5HYJ3 339 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 CELF3Q5SZQ8 465 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 PDZK1Q5T2W1 519 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 ATP1A1-AS1Q5TC04 95 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 IRAK1BP1Q5VVH5 260 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 OR2A2Q6IF42 318 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 TMEM107Q6UX40 140 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 ACOT1Q86TX2 421 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 FAM83FQ8NEG4 500 aaPredicted RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 TRPV1Q8NER1 839 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 ADIPOR1Q96A54 375 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 NAF1Q96HR8 494 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 ELMO2Q96JJ3 720 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 ATP6V1G3Q96LB4 118 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 SLC30A2Q9BRI3 323 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 TSSK1BQ9BXA7 367 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 LRRN3Q9H3W5 708 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 ALG9Q9H6U8 611 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 GEMIN7Q9H840 131 aaKnown RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 GPN2Q9H9Y4 310 aaPredicted RBP4.31□□□□□ -1.72
LSM5-205ENST00000409952 CYP3A43Q9HB55 503 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 C3orf14Q9HBI5 128 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 PPIAL4AQ9Y536 164 aa4.31□□□□□ -1.72
LSM5-205ENST00000409952 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 ASPDHA6ND91 283 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 TCP10L2B9ZVM9 353 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 ANHXE9PGG2 379 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 GOLGA8TH3BQL2 631 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CIDEAO60543 219 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 TOXO94900 526 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 GLUD1P00367 558 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CRYGCP07315 174 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CCDC172P0C7W6 258 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 HSMCR30P0CW71 290 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 PRKACAP17612 351 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CHMLP26374 656 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CCKBRP32239 447 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 LONP1P36776 959 aaKnown RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 FEN1P39748 380 aaKnown RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 GLUD2P49448 558 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 LBX1P52954 281 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CRYBB1P53674 252 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 RGS8P57771 180 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 BTG1P62324 171 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 EWSR1Q01844 656 aaKnown RBP eCLIP4.3□□□□□ -1.72
LSM5-205ENST00000409952 LIPEQ05469 1076 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 BST2Q10589 180 aaKnown RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 DLG1Q12959 904 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 KRT71Q3SY84 523 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 FAM106AQ4KMX7 169 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 RFTN2Q52LD8 501 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 HIKESHIQ53FT3 197 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 SFT2D3Q587I9 215 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 SIRPB2Q5JXA9 342 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 TCHHL1Q5QJ38 904 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 BEND6Q5SZJ8 279 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 AGBL2Q5U5Z8 902 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 LIPNQ5VXI9 398 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 FAM71F2Q6NXP2 309 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 VITQ6UXI7 678 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 ZNF730Q6ZMV8 503 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 Q6ZVQ6 151 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 DND1Q8IYX4 353 aaKnown RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 NAGSQ8N159 534 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 GTPBP8Q8N3Z3 284 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms