RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 RPL5P46777 297 aaKnown RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 LGALS4P56470 323 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 RHDQ02161 417 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TRAM2Q15035 370 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TMEM236Q5W0B7 351 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 CES4AQ5XG92 561 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 DRICH1Q6PGQ1 229 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 FRZBQ92765 325 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 DPAGT1Q9H3H5 408 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 IFT172Q9UG01 1749 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TRIP11Q15643 1979 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 PMM2O15305 246 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TGM4P49221 684 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 GRB7Q14451 532 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 KIAA0319Q5VV43 1072 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ADOQ96SZ5 270 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 GRPP07492 148 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 COL9A3Q14050 684 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TRILQ7L0X0 811 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 IQCF1Q8N6M8 205 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 IL17RDQ8NFM7 739 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 CANT1Q8WVQ1 401 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TM9SF3Q9HD45 589 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 NDUFAF4Q9P032 175 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 SAGE2PA6NJ88 616 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 SIGLEC6O43699 453 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ADAMTS4O75173 837 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 EXOSC7Q15024 291 aaKnown RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 OR4K15Q8NH41 348 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 C12orf43Q96C57 262 aaKnown RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 NANOGQ9H9S0 305 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 KLHL13Q9P2N7 655 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 PCDHGA10Q9Y5H3 936 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ANHXE9PGG2 379 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 C1GALT1C1LP0DN25 315 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 SERPINA2P20848 420 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 NFYBP25208 207 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 RABL3Q5HYI8 236 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 HES5Q5TA89 166 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 GLT8D1Q68CQ7 371 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 SLC43A2Q8N370 569 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 OR51Q1Q8NH59 317 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 L2HGDHQ9H9P8 463 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ERVK13-1Q9NX77 482 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 SALL4Q9UJQ4 1053 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ARAFP10398 606 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 STOMP27105 288 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 EMP3P54852 163 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 GINS1Q14691 196 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 KIAA0930Q6ICG6 404 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TPRA1Q86W33 373 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 PSD4Q8NDX1 1056 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 SLC2A12Q8TD20 617 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 RTP3Q9BQQ7 232 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 DEFB127Q9H1M4 99 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 IGSF9Q9P2J2 1179 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TESQ9UGI8 421 aaKnown RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 RAB26Q9ULW5 256 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 RGPD2P0DJD1 1756 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 DCDC2BA2VCK2 349 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 TOR1AO14656 332 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ACADVLP49748 655 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 RHEBQ15382 184 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 DEFB109BQ30KR1 87 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 PLBD1Q6P4A8 553 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 PDSS2Q86YH6 399 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 OR2A12Q8NGT7 310 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 GOT1L1Q8NHS2 421 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF599Q96NL3 588 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ZFYVE21Q9BQ24 234 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 HDHD5Q9BXW7 423 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 KATNBL1Q9H079 304 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 OR5K4A6NMS3 321 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 KIAA0355O15063 1070 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 EFSO43281 561 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 PRAMEF11O60813 436 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 ATF6P18850 670 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 REEP3Q6NUK4 255 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 PPP1R3BQ86XI6 285 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF695Q8IW36 515 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 STT3BQ8TCJ2 826 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 ROPN1LQ96C74 230 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 DCLRE1CQ96SD1 692 aaKnown RBP7.98□□□□□ -1.13
SCN9A-203ENST00000409672 COQ3Q9NZJ6 369 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 WIF1Q9Y5W5 379 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 TRGV8A0A0C4DH27 118 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 SCRG1O75711 98 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 SLC6A4P31645 630 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 VASPP50552 380 aaPredicted RBP7.98□□□□□ -1.13
SCN9A-203ENST00000409672 PTGR1Q14914 329 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 AARDQ4LEZ3 155 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 CLEC17AQ6ZS10 378 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 C22orf15Q8WYQ4 148 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 ITFG2Q969R8 447 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 DGCR14Q96DF8 476 aaKnown RBP7.98□□□□□ -1.13
SCN9A-203ENST00000409672 HCAR1Q9BXC0 346 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 GFOD1Q9NXC2 390 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 SCP2D1Q9UJQ7 156 aa7.98□□□□□ -1.13
SCN9A-203ENST00000409672 SLC10A3P09131 477 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms