RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 RILPQ96NA2 401 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 FRMD6Q96NE9 622 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 CCDC115Q96NT0 180 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 OR52E6Q96RD3 313 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 TMEM120AQ9BXJ8 343 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 Q9N2J8 555 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 ASF1BQ9NVP2 202 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 TRIM33Q9UPN9 1127 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 OR10H1Q9Y4A9 318 aa18.68■□□□□ 0.58
PTCD3-202ENST00000409326 FAM234BA2RU67 622 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 TP53I11O14683 189 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 PEX1O43933 1283 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 P04436 131 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 HMGN2P05204 90 aaKnown RBP18.67■□□□□ 0.58
PTCD3-202ENST00000409326 PRIM2P49643 509 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 MEOX1P50221 254 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 GPR85P60893 370 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 PMP22Q01453 160 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 TP53BP2Q13625 1128 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 SQLEQ14534 574 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 VPS26BQ4G0F5 336 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 CYP27C1Q4G0S4 372 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 EXOSC6Q5RKV6 272 aaKnown RBP18.67■□□□□ 0.58
PTCD3-202ENST00000409326 SLC22A10Q63ZE4 541 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 BHLHB9Q6PI77 547 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.67■□□□□ 0.58
PTCD3-202ENST00000409326 OR4N2Q8NGD1 307 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 OR5M3Q8NGP4 307 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 DNAJB8Q8NHS0 232 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 GOT1L1Q8NHS2 421 aaPredicted RBP18.67■□□□□ 0.58
PTCD3-202ENST00000409326 MIB2Q96AX9 1013 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 SLC35A4Q96G79 324 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 SECISBP2Q96T21 854 aaKnown RBP18.67■□□□□ 0.58
PTCD3-202ENST00000409326 AGPAT4Q9NRZ5 378 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 DEPPQ9NTK1 212 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 CNIH4Q9P003 139 aa18.67■□□□□ 0.58
PTCD3-202ENST00000409326 OR6C70A6NIJ9 312 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 TSPAN2O60636 221 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 ABCB7O75027 752 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 NKX2-2O95096 273 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 CPSF4O95639 269 aaKnown RBP18.66■□□□□ 0.58
PTCD3-202ENST00000409326 CRYABP02511 175 aaKnown RBP18.66■□□□□ 0.58
PTCD3-202ENST00000409326 ACP2P11117 423 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 CNR1P21554 472 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 ARFIP2P53365 341 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 RPP38P78345 283 aaKnown RBP18.66■□□□□ 0.58
PTCD3-202ENST00000409326 GAB1Q13480 694 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 LASP1Q14847 261 aaKnown RBP18.66■□□□□ 0.58
PTCD3-202ENST00000409326 METTL21CQ5VZV1 264 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 MSANTD1Q6ZTZ1 278 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 NUP54Q7Z3B4 507 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 CPSF7Q8N684 471 aaKnown RBP18.66■□□□□ 0.58
PTCD3-202ENST00000409326 POGLUT1Q8NBL1 392 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 OR5AK3PQ8NH89 298 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 SPPL2AQ8TCT8 520 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 FAR1Q8WVX9 515 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 HGDQ93099 445 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 CHMP6Q96FZ7 201 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 ZNF385DQ9H6B1 395 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 GPATCH2Q9NW75 528 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 TMEM45AQ9NWC5 275 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 KLHL14Q9P2G3 628 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 CNOT11Q9UKZ1 510 aaKnown RBP18.66■□□□□ 0.58
PTCD3-202ENST00000409326 CBLCQ9ULV8 474 aa18.66■□□□□ 0.58
PTCD3-202ENST00000409326 ZGRF1Q86YA3 2104 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 A0A0G2JMM0 328 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 RNF103-CHMP3A0A140T963 221 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 A0A1W2PPB8 328 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 A0A1W2PRS3 328 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 KIR3DP1A8MWS1 328 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 UGT2B11O75310 529 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 REM1O75628 298 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 PLA2G2AP14555 144 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 NCF2P19878 526 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-202ENST00000409326 UQCRC2P22695 453 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 IL12BP29460 328 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 GABRA3P34903 492 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 KRT20P35900 424 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 RCAN2Q14206 197 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 TIGD2Q4W5G0 525 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 PRAMEF20Q5VT98 475 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 ZNF324BQ6AW86 544 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-202ENST00000409326 CDC73Q6P1J9 531 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 TMEM81Q6P7N7 255 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 FUNDC1Q8IVP5 155 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 ZFP62Q8NB50 900 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-202ENST00000409326 SLC16A11Q8NCK7 471 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 OR2M7Q8NG81 312 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 FBXO30Q8TB52 745 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 GPR151Q8TDV0 419 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 SLC9A6Q92581 669 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 DIO2Q92813 273 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 C16orf58Q96GQ5 468 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 COL21A1Q96P44 957 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 PANX1Q96RD7 426 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 FAM173AQ9BQD7 235 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 ACTRT3Q9BYD9 372 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 RABEP2Q9H5N1 569 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 OLAHQ9NV23 265 aa18.65■□□□□ 0.58
PTCD3-202ENST00000409326 RP1L1Q8IWN7 2480 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms