RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 KLHL29Q96CT2 875 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 ZFP3Q96NJ6 502 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 DACH2Q96NX9 599 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 YIPF4Q9BSR8 244 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 LRRC1Q9BTT6 524 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 SFXN3Q9BWM7 321 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 RBM24Q9BX46 236 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 OR2B2Q9GZK3 357 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 ACSS3Q9H6R3 686 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF395Q9H8N7 513 aaPredicted RBP8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 BRF2Q9HAW0 419 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 FARSBQ9NSD9 589 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 ZDHHC18Q9NUE0 388 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 KLRF1Q9NZS2 232 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 PRODH2Q9UF12 536 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 MAPRE3Q9UPY8 281 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 PLLPQ9Y342 182 aa8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
NIF3L1-203ENST00000409129 KIAA1549Q9HCM3 1950 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 ESYT3A0FGR9 886 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 FRG2CA6NGY1 282 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 H0Y3Z8 333 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 PPP6CO00743 305 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 TO15178 435 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 WIPF1O43516 503 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 REM1O75628 298 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 OTCP00480 354 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 HRGP04196 525 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 COL6A2P12110 1019 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 HOXC12P31275 282 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 STARP49675 285 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 EMDP50402 254 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 GFRA1P56159 465 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 EEF1A1P68104 462 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 HMGCS1Q01581 520 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 DUSP2Q05923 314 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 GAB1Q13480 694 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 TSNAXIP1Q2TAA8 658 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 UBAP2Q5T6F2 1119 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 EEF1A1P5Q5VTE0 462 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 FAM180BQ6P0A1 224 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 SCIMPQ6UWF3 145 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 RPS27LQ71UM5 84 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF572Q7Z3I7 529 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 LUZP2Q86TE4 346 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 PLCZ1Q86YW0 608 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF483Q8TF39 744 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 SELENOMQ8WWX9 145 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 TMBIM1Q969X1 311 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 ISL2Q96A47 359 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 INTS12Q96CB8 462 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 TMCO6Q96DC7 493 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 CNRIP1Q96F85 164 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF681Q96N22 645 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 COL21A1Q96P44 957 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 FAIM2Q9BWQ8 316 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 FUT8Q9BYC5 575 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 PIGMQ9H3S5 423 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 NEUROD4Q9HD90 331 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 NMRK1Q9NWW6 199 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 GALNT8Q9NY28 637 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 TAS2R10Q9NYW0 307 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 NINJ2Q9NZG7 142 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 EHD3Q9NZN3 535 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 XPR1Q9UBH6 696 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 SNX6Q9UNH7 406 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 GPR55Q9Y2T6 319 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 MRPS18CQ9Y3D5 142 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF780BQ9Y6R6 833 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 HEATR5AQ86XA9 2040 aa8.32□□□□□ -1.08
NIF3L1-203ENST00000409129 SH3D21A4FU49 640 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 OR6C70A6NIJ9 312 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 RNF212BA8MTL3 300 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 A8MXE2 369 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 PLOD2O00469 737 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 CASKO14936 926 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 BCAS2O75934 225 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 INHBAP08476 426 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 RPS17P08708 135 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 PCSK2P16519 638 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 TSPAN8P19075 237 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 CD53P19397 219 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 CHMP24386 653 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 SRD5A2P31213 254 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 CPA2P48052 419 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 ALDH9A1P49189 494 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 SERPINB9P50453 376 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 LHX2P50458 406 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 DIO3P55073 304 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 CDH13P55290 713 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 ETF1P62495 437 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 MRPS35P82673 323 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 POU4F3Q15319 338 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 LTB4RQ15722 352 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 LETMD1Q6P1Q0 360 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 AAGABQ6PD74 315 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 PLXDC2Q6UX71 529 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 SYT10Q6XYQ8 523 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 IFNEQ86WN2 208 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms