RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 THP07101 528 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 CBSLP0DN79 551 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 NPR2P20594 1047 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 CBSP35520 551 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SEC61A1P61619 476 aaKnown RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 KCNA10Q16322 511 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SGCAQ16586 387 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 ZNF660Q6AZW8 331 aaPredicted RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 SFRP4Q6FHJ7 346 aaPredicted RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 ELP2Q6IA86 826 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SLITRK4Q8IW52 837 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 NPAS3Q8IXF0 933 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 PUSL1Q8N0Z8 303 aaKnown RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 L3MBTL4Q8NA19 623 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 EDARADDQ8WWZ3 215 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 FATE1Q969F0 183 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 ELP4Q96EB1 424 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 CHFRQ96EP1 664 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 ARL5BQ96KC2 179 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 OR10A4Q9H209 315 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 TAS2R3Q9NYW6 316 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 MRPL15Q9P015 296 aaKnown RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 MAFFQ9ULX9 164 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 HELZP42694 1942 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 GREB1Q4ZG55 1949 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 DISC1C4P0D8 188 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 CBR1P16152 277 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 PPIBP23284 216 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 THBS2P35442 1172 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 OR10A3P58181 314 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 SLC5A12Q1EHB4 618 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 ZNF791Q3KP31 576 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 METTL11BQ5VVY1 283 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 HACD4Q5VWC8 232 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 PTRHD1Q6GMV3 140 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 CXorf57Q6NSI4 855 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 ZNF613Q6PF04 617 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 NCEH1Q6PIU2 408 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 CAMKVQ8NCB2 501 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 HJURPQ8NCD3 748 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 ARRDC4Q8NCT1 418 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 CHST13Q8NET6 341 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 OR51Q1Q8NH59 317 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 GLYATL2Q8WU03 294 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 UBTD2Q8WUN7 234 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 GMLQ99445 158 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 TSNAXQ99598 290 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 POLDIP3Q9BY77 421 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 ACTR6Q9GZN1 396 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 P2RY12Q9H244 342 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 MTG2Q9H4K7 406 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 WDR26Q9H7D7 661 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 NPDC1Q9NQX5 325 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 NFKBIL1Q9UBC1 381 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 MIOXQ9UGB7 285 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 CBLCQ9ULV8 474 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 LHX6Q9UPM6 363 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 GPR52Q9Y2T5 361 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 MYO10Q9HD67 2058 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 FXYD6-FXYD2A0A087WZ82 144 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 OR6C68A6NDL8 312 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 SEMA7AO75326 666 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 S100A9P06702 114 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 GIPP09681 153 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 ACP2P11117 423 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 PRPH2P23942 346 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 ELAVL4P26378 380 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 PTGER3P43115 390 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 CENPFP49454 3210 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 SSTP61278 116 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 UBXN2BQ14CS0 331 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 BOLLQ8N9W6 283 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 OR11G2Q8NGC1 345 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 TRMT10AQ8TBZ6 339 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 ZNF285Q96NJ3 590 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 ZYG11BQ9C0D3 744 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 FXYD6Q9H0Q3 95 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 ABCG4Q9H172 646 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 RSPH9Q9H1X1 276 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 DDX31Q9H8H2 851 aaKnown RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 ZNF69Q9UC07 566 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 EPHA6Q9UF33 1036 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 KCND3Q9UK17 655 aa12.06□□□□□ -0.48
HERC3-203ENST00000407637 RPH3AQ9Y2J0 694 aaPredicted RBP12.06□□□□□ -0.48
HERC3-203ENST00000407637 KCNE1BA0A087WTH5 132 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 SCAMP1O15126 338 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 SMAD6O43541 496 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 SH3BGRLO75368 114 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 POP7O75817 140 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 HTR3BO95264 441 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 SYN1P17600 705 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 LPOP22079 712 aaPredicted RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 RAD52P43351 418 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 RAB40BQ12829 278 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 SNTB2Q13425 540 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 SNTB1Q13884 538 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 MICBQ29980 383 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms