RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FAF1Q9UNN5 650 aaPredicted RBP27.08■■□□□ 1.93
USP42-202ENST00000404008 PCDHB14Q9Y5E9 798 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 CSAG2Q9Y5P2 127 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 FBP2O00757 339 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 NKX2-2O95096 273 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 KCNH1O95259 989 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 FBXO45P0C2W1 286 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 CYB561P49447 251 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 RPS26P62854 115 aaKnown RBP27.07■■□□□ 1.92
USP42-202ENST00000404008 GPALPP1Q8IXQ4 340 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 PRR22Q8IZ63 422 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 ZFP90Q8TF47 636 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 JADE3Q92613 823 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 LRRC37BQ96QE4 947 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 SERHL2Q9H4I8 314 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 NPFFR2Q9Y5X5 522 aa27.07■■□□□ 1.92
USP42-202ENST00000404008 LOC100653049A0A140TA62 436 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 BBIP1A8MTZ0 92 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 CAPN14A8MX76 684 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 DPM1O60762 260 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 KRT34O76011 436 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 KRT16P08779 473 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 GABRA3P34903 492 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 MAN2A2P49641 1150 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 TNFSF10P50591 281 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 OC90Q02509 493 aaPredicted RBP27.06■■□□□ 1.92
USP42-202ENST00000404008 CYLC2Q14093 348 aaPredicted RBP27.06■■□□□ 1.92
USP42-202ENST00000404008 DUSP5Q16690 384 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 ZNF791Q3KP31 576 aaPredicted RBP27.06■■□□□ 1.92
USP42-202ENST00000404008 COQ5Q5HYK3 327 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 IL20RBQ6UXL0 311 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 ZNF227Q86WZ6 799 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 SLC34A3Q8N130 599 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 RBMXL3Q8N7X1 1067 aaKnown RBP27.06■■□□□ 1.92
USP42-202ENST00000404008 OR4N2Q8NGD1 307 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 DNAJB8Q8NHS0 232 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 RP9Q8TA86 221 aaKnown RBP27.06■■□□□ 1.92
USP42-202ENST00000404008 MIPOL1Q8TD10 442 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 SPACA9Q96E40 222 aaPredicted RBP27.06■■□□□ 1.92
USP42-202ENST00000404008 OTUB1Q96FW1 271 aaPredicted RBP27.06■■□□□ 1.92
USP42-202ENST00000404008 SIGLEC12Q96PQ1 595 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 Q9N2J8 555 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 GIN1Q9NXP7 522 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 SLC25A37Q9NYZ2 338 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 LRFN1Q9P244 771 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 OR10H1Q9Y4A9 318 aa27.06■■□□□ 1.92
USP42-202ENST00000404008 TLN1Q9Y490 2541 aaKnown RBP27.05■■□□□ 1.92
USP42-202ENST00000404008 SPENQ96T58 3664 aaKnown RBP27.05■■□□□ 1.92
USP42-202ENST00000404008 A8MVJ9 347 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 ATXN7O15265 892 aaPredicted RBP27.05■■□□□ 1.92
USP42-202ENST00000404008 ALOX5P09917 674 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 MATN1P21941 496 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 PLCXD2Q0VAA5 305 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 OR1C1Q15619 314 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 DLEU7Q6UYE1 221 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 MSRB3Q8IXL7 192 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 DND1Q8IYX4 353 aaKnown RBP27.05■■□□□ 1.92
USP42-202ENST00000404008 CYP4Z2PQ8N1L4 340 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 POU5F2Q8N7G0 328 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 CATSPER1Q8NEC5 780 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 GPR151Q8TDV0 419 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 PIK3R3Q92569 461 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 OMA1Q96E52 524 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 AURKBQ96GD4 344 aaPredicted RBP27.05■■□□□ 1.92
USP42-202ENST00000404008 STACQ99469 402 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 PIGUQ9H490 435 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 DUSP22Q9NRW4 184 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 HPF1Q9NWY4 346 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 MAP10Q9P2G4 905 aa27.05■■□□□ 1.92
USP42-202ENST00000404008 TRBV5-3A0A0A0MS03 114 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 NEURL1O76050 574 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 COX4I1P13073 169 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 CASP9P55211 416 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 STX5Q13190 355 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 CYP27C1Q4G0S4 372 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 REP15Q6BDI9 236 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 RNF130Q86XS8 419 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 MDS2Q8NDY4 140 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 TMBIM1Q969X1 311 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 OR7D2Q96RA2 312 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP27.04■■□□□ 1.92
USP42-202ENST00000404008 TPT1P8Q9HAU6 139 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 VAPAQ9P0L0 249 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 CBLCQ9ULV8 474 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 KALRNO60229 2985 aa27.04■■□□□ 1.92
USP42-202ENST00000404008 ATRXP46100 2492 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 PPM1BO75688 479 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 KRT75O95678 551 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 NAGAP17050 411 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 TMED10P49755 219 aaKnown RBP27.03■■□□□ 1.92
USP42-202ENST00000404008 NTRK2Q16620 822 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 MMEL1Q495T6 779 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 SPINK14Q6IE38 97 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 ANGPTL8Q6UXH0 198 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 DHDDSQ86SQ9 333 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 LSM14AQ8ND56 463 aaKnown RBP27.03■■□□□ 1.92
USP42-202ENST00000404008 OR5D16Q8NGK9 328 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 PNPT1Q8TCS8 783 aaKnown RBP27.03■■□□□ 1.92
USP42-202ENST00000404008 ADAMTS15Q8TE58 950 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 SLC35A4Q96G79 324 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms