RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TNIP2Q8NFZ5 429 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.01□□□□□ -0.17
TPM1-207ENST00000403994 L2HGDHQ9H9P8 463 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 MYNNQ9NPC7 610 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 SERHLQ9NQF3 203 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 OXSMQ9NWU1 459 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 CAMK2AQ9UQM7 478 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 L3MBTL1Q9Y468 752 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 POLR3HQ9Y535 204 aaPredicted RBP14.01□□□□□ -0.17
TPM1-207ENST00000403994 WIF1Q9Y5W5 379 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 NF1P21359 2839 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 ITPR3Q14573 2671 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 AKAP6Q13023 2319 aa14.01□□□□□ -0.17
TPM1-207ENST00000403994 C2orf72A6NCS6 295 aa14□□□□□ -0.17
TPM1-207ENST00000403994 AHRRA9YTQ3 701 aa14□□□□□ -0.17
TPM1-207ENST00000403994 MYO1GB0I1T2 1018 aa14□□□□□ -0.17
TPM1-207ENST00000403994 COPEO14579 308 aa14□□□□□ -0.17
TPM1-207ENST00000403994 ABCB7O75027 752 aa14□□□□□ -0.17
TPM1-207ENST00000403994 CRCPO75575 148 aa14□□□□□ -0.17
TPM1-207ENST00000403994 EPPINO95925 133 aa14□□□□□ -0.17
TPM1-207ENST00000403994 KRT4P19013 534 aa14□□□□□ -0.17
TPM1-207ENST00000403994 BMP5P22003 454 aa14□□□□□ -0.17
TPM1-207ENST00000403994 CEACAM8P31997 349 aaPredicted RBP14□□□□□ -0.17
TPM1-207ENST00000403994 MC3RP41968 323 aa14□□□□□ -0.17
TPM1-207ENST00000403994 CCT5P48643 541 aa14□□□□□ -0.17
TPM1-207ENST00000403994 PSPHP78330 225 aa14□□□□□ -0.17
TPM1-207ENST00000403994 MYBPHQ13203 477 aa14□□□□□ -0.17
TPM1-207ENST00000403994 CLEC6AQ6EIG7 209 aa14□□□□□ -0.17
TPM1-207ENST00000403994 YRDCQ86U90 279 aaKnown RBP14□□□□□ -0.17
TPM1-207ENST00000403994 C4orf33Q8N1A6 199 aa14□□□□□ -0.17
TPM1-207ENST00000403994 WDSUB1Q8N9V3 476 aa14□□□□□ -0.17
TPM1-207ENST00000403994 CCDC63Q8NA47 563 aa14□□□□□ -0.17
TPM1-207ENST00000403994 RNF138Q8WVD3 245 aa14□□□□□ -0.17
TPM1-207ENST00000403994 ABTB1Q969K4 478 aaPredicted RBP14□□□□□ -0.17
TPM1-207ENST00000403994 BBS4Q96RK4 519 aa14□□□□□ -0.17
TPM1-207ENST00000403994 ADOQ96SZ5 270 aa14□□□□□ -0.17
TPM1-207ENST00000403994 ZNF559Q9BR84 538 aa14□□□□□ -0.17
TPM1-207ENST00000403994 OR2B2Q9GZK3 357 aa14□□□□□ -0.17
TPM1-207ENST00000403994 STMN4Q9H169 189 aaPredicted RBP14□□□□□ -0.17
TPM1-207ENST00000403994 MIEF1Q9NQG6 463 aa14□□□□□ -0.17
TPM1-207ENST00000403994 GRID1Q9ULK0 1009 aa14□□□□□ -0.17
TPM1-207ENST00000403994 EXO1Q9UQ84 846 aaKnown RBP14□□□□□ -0.17
TPM1-207ENST00000403994 PTGDR2Q9Y5Y4 395 aa14□□□□□ -0.17
TPM1-207ENST00000403994 DVL2O14641 736 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 TSPAN2O60636 221 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 REM1O75628 298 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 JUNP05412 331 aaKnown RBP13.99□□□□□ -0.17
TPM1-207ENST00000403994 UROSP10746 265 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 CPA3P15088 417 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 IL12BP29460 328 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 NTSP30990 170 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 MPIP34949 423 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 TIMP3P35625 211 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 ASCL1P50553 236 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 NCBP2P52298 156 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM1-207ENST00000403994 PCLAFQ15004 111 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 LIPMQ5VYY2 423 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 NSUN5P2Q63ZY6 315 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 TMEM107Q6UX40 140 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 IKBIPQ70UQ0 350 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 LARP4Q71RC2 724 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM1-207ENST00000403994 TMEM200AQ86VY9 491 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 SLC44A2Q8IWA5 706 aaPredicted RBP13.99□□□□□ -0.17
TPM1-207ENST00000403994 FAM76AQ8TAV0 307 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 TMCO6Q96DC7 493 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 WDYHV1Q96HA8 205 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 SH3GL2Q99962 352 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 SLC24A3Q9HC58 644 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 TAS2R9Q9NYW1 312 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 CCL27Q9Y4X3 112 aa13.99□□□□□ -0.17
TPM1-207ENST00000403994 A0A087WV62 115 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 MBD3L4A6NDZ8 208 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 MBD3L3A6NE82 208 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 MBD3L5A6NJ08 208 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 B4DXG7 233 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 COQ9O75208 318 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 SLITRK5O94991 958 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 PSMG1O95456 288 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 ACTL6AO96019 429 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 POU3F2P20265 443 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 GCKP35557 465 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 KRT20P35900 424 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 ZNF136P52737 540 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 PSG6Q00889 435 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 SLC18A2Q05940 514 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 C2orf80Q0P641 193 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 EFR3AQ14156 821 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 NOXRED1Q6NXP6 359 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 POMZP3Q6PJE2 187 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 C10orf107Q8IVU9 208 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 OR4N2Q8NGD1 307 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 OR14L1PQ8NHC6 308 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 MBD3L2Q8NHZ7 208 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.98□□□□□ -0.17
TPM1-207ENST00000403994 EFHD2Q96C19 240 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 TRIB1Q96RU8 372 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 ANKZF1Q9H8Y5 726 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 RRAGDQ9NQL2 400 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 MKS1Q9NXB0 559 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 TAS2R7Q9NYW3 318 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms