RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ANKRD60Q9BZ19 345 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 CNIH4Q9P003 139 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 KCMF1Q9P0J7 381 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 RIMS3Q9UJD0 308 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 PRAMEF26H0Y7S4 382 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 PTGER1P34995 402 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 DSC1Q08554 894 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 LEG1Q6P5S2 330 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 CLCA1A8K7I4 914 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 FRS3O43559 492 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 ADGRG5Q8IZF4 528 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 RNF175Q8N4F7 328 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 CDRT4Q8N9R6 151 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 EGLN2Q96KS0 407 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 SAMD8Q96LT4 415 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 STARD5Q9NSY2 213 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 DNMT3BQ9UBC3 853 aaKnown RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 HSFX1Q9UBD0 423 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 HIDE1A8MVS5 230 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 RBBP9O75884 186 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 RGS9O75916 674 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 GTF2F2P13984 249 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 DEFA5Q01523 94 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 PTPRRQ15256 657 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 SLC25A25Q6KCM7 469 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 FIP1L1Q6UN15 594 aaKnown RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 PGBD5Q8N414 524 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF300Q96RE9 604 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 GSKIPQ9P0R6 139 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 SH3PXD2BA1X283 911 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 PCP4L1A6NKN8 68 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 POLR1CO15160 346 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 RDH16O75452 317 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 GRK5P34947 590 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 SOX9P48436 509 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 KLHL42Q9P2K6 505 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 FBXL3Q9UKT7 428 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 DNMT3AQ9Y6K1 912 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 MROH6A6NGR9 719 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 VSTM5A8MXK1 200 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 HMGN2P05204 90 aaKnown RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 C1SP09871 688 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 HERV-K104P61576 105 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 DPH1Q9BZG8 443 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 LHPPQ9H008 270 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 HEBP1Q9NRV9 189 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 CD207Q9UJ71 328 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 ARNTLO00327 626 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 C1orf105O95561 183 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 KCTD11Q693B1 232 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 ZC3H14Q6PJT7 736 aaKnown RBP17.22■□□□□ 0.35
COL18A1-204ENST00000400337 ZER1Q7Z7L7 766 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 SERPINA11Q86U17 422 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 FAM217AQ8IXS0 508 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 KLHL21Q9UJP4 597 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 SLC7A7Q9UM01 511 aa17.22■□□□□ 0.35
COL18A1-204ENST00000400337 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 SGK494L7N484 410 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 ATF4P18848 351 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-204ENST00000400337 FRKP42685 505 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-204ENST00000400337 MAGEA8P43361 318 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 PRLHRP49683 370 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 CAPZA1P52907 286 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 TMEM151BQ8IW70 566 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 DENND6BQ8NEG7 585 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 OR51L1Q8NGJ5 315 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 HHIPQ96QV1 700 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 SLC6A16Q9GZN6 736 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 C20orf27Q9GZN8 174 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 ALG5Q9Y673 324 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 A0A0A6YYC8 382 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-204ENST00000400337 I3L1I5 382 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-204ENST00000400337 GABRB3P28472 473 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 RIDAP52758 137 aaKnown RBP17.21■□□□□ 0.35
COL18A1-204ENST00000400337 CTXN1P60606 82 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 DEFB133Q30KQ1 61 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 ZSCAN4Q8NAM6 433 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-204ENST00000400337 ABCD2Q9UBJ2 740 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 FMO6PO60774 539 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 ARHGAP19Q14CB8 494 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 MAMDC2Q7Z304 686 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-204ENST00000400337 OR2T4Q8NH00 348 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 PGAM5Q96HS1 289 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 HOXD1Q9GZZ0 328 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 ERVK13-1Q9NX77 482 aa17.21■□□□□ 0.35
COL18A1-204ENST00000400337 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 TEX13CA0A0J9YWL9 993 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 ISPDA4D126 451 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 PRLP01236 227 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 PVALBP20472 110 aaPredicted RBP17.21■□□□□ 0.34
COL18A1-204ENST00000400337 PSMB5P28074 263 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF181Q2M3W8 571 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 PHOSPHO2Q8TCD6 241 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 NRG4Q8WWG1 115 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 TESCQ96BS2 214 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 MYNNQ9NPC7 610 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 FKBP14Q9NWM8 211 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 B4GALT7Q9UBV7 327 aa17.21■□□□□ 0.34
COL18A1-204ENST00000400337 A0A0J9YY10 115 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms