RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 ZNF888P0CJ79 500 aaPredicted RBP17.48■□□□□ 0.39
USP48-204ENST00000400301 EDNRAP25101 427 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 XCR1P46094 333 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 RBM45Q8IUH3 476 aaKnown RBP17.48■□□□□ 0.39
USP48-204ENST00000400301 SGPP1Q9BX95 441 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 GLIPR2Q9H4G4 154 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 ANK1P16157 1881 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 UBE2QL1A1L167 161 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 FAM47E-STBD1D6RA91 191 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 TGFBR1P36897 503 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 CHRNEQ04844 493 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 ILKQ13418 452 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 C1orf61Q13536 156 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 LRIT3Q3SXY7 679 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 MEIOBQ8N635 442 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 OMA1Q96E52 524 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 BRD7Q9NPI1 651 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 MBD1Q9UIS9 605 aaPredicted RBP17.48■□□□□ 0.39
USP48-204ENST00000400301 ADAM29Q9UKF5 820 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 KLK4Q9Y5K2 254 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 MIA3Q5JRA6 1907 aa17.48■□□□□ 0.39
USP48-204ENST00000400301 ARL6IP5O75915 188 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 ELAVL4P26378 380 aaKnown RBP17.47■□□□□ 0.39
USP48-204ENST00000400301 PYCR1P32322 319 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 MAP2K3P46734 347 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 SHC2P98077 582 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 C6orf183Q5T699 404 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 BCDIN3DQ7Z5W3 292 aaKnown RBP17.47■□□□□ 0.39
USP48-204ENST00000400301 ENAMQ9NRM1 1142 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 C1GALT1Q9NS00 363 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 AIFM1O95831 613 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 MAGEA2P43356 314 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 KCNJ5P48544 419 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 WNT3P56703 355 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 FBXO46Q6PJ61 603 aaPredicted RBP17.47■□□□□ 0.39
USP48-204ENST00000400301 DHRS4L2Q6PKH6 230 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 LINGO2Q7L985 606 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 MOSPD2Q8NHP6 518 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 MS4A4EQ96PG1 132 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 OR7D2Q96RA2 312 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 ZFC3H1O60293 1989 aaKnown RBP17.47■□□□□ 0.39
USP48-204ENST00000400301 GJA8P48165 433 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 MASP1P48740 699 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 REEP5Q00765 189 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 OR2G6Q5TZ20 316 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 FAHD1Q6P587 224 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 PAMR1Q6UXH9 720 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 FAM83HQ6ZRV2 1179 aaPredicted RBP17.47■□□□□ 0.39
USP48-204ENST00000400301 CSNK1A1LQ8N752 337 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 PDXPQ96GD0 296 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 ERMAPQ96PL5 475 aaPredicted RBP17.47■□□□□ 0.39
USP48-204ENST00000400301 TCF7L1Q9HCS4 588 aa17.47■□□□□ 0.39
USP48-204ENST00000400301 GPR89AB7ZAQ6 455 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 RPP14O95059 124 aaKnown RBP17.46■□□□□ 0.39
USP48-204ENST00000400301 PRSS23O95084 383 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 GPR89BP0CG08 455 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 SOX9P48436 509 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 TCTN1Q2MV58 587 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 ADAMTSL4Q6UY14 1074 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 RNF165Q6ZSG1 346 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 OR8H1Q8NGG4 311 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 DPH1Q9BZG8 443 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 EGLN3Q9H6Z9 239 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 CXXC1Q9P0U4 656 aaPredicted RBP17.46■□□□□ 0.39
USP48-204ENST00000400301 GRIP1Q9Y3R0 1128 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 TRAPPC13A5PLN9 417 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 RLN1P04808 185 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 PSMD4P55036 377 aaKnown RBP17.46■□□□□ 0.39
USP48-204ENST00000400301 CSNK1G2P78368 415 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 UBE2UQ5VVX9 321 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 TANGO2Q6ICL3 276 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 COQ10AQ96MF6 247 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 PNO1Q9NRX1 252 aaKnown RBP17.46■□□□□ 0.39
USP48-204ENST00000400301 C14orf105Q9NVL8 296 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 SLC7A7Q9UM01 511 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 BRCA1P38398 1863 aaKnown RBP17.46■□□□□ 0.39
USP48-204ENST00000400301 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 A0A1W2PPK0 400 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 TMEM150CB9EJG8 249 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 WWP2O00308 870 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 HOXC11O43248 304 aaPredicted RBP17.46■□□□□ 0.39
USP48-204ENST00000400301 DBIP07108 87 aaKnown RBP17.46■□□□□ 0.39
USP48-204ENST00000400301 AHCYP23526 432 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 ACVR1BP36896 505 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 RHAGQ02094 409 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 PIP5KL1Q5T9C9 394 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 STEAP3Q658P3 488 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 TOMM5Q8N4H5 51 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 AMDHD1Q96NU7 426 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 TIMM29Q9BSF4 260 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 GABARAPL3Q9BY60 117 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 SPNS1Q9H2V7 528 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 A4GALTQ9NPC4 353 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 GNG8Q9UK08 70 aa17.46■□□□□ 0.39
USP48-204ENST00000400301 METTL15A6NJ78 407 aa17.46■□□□□ 0.38
USP48-204ENST00000400301 C12orf71A8MTZ7 269 aa17.46■□□□□ 0.38
USP48-204ENST00000400301 BLOC1S5-TXNDC5H3BN57 136 aa17.46■□□□□ 0.38
USP48-204ENST00000400301 GPR19Q15760 415 aa17.46■□□□□ 0.38
USP48-204ENST00000400301 CEACAM19Q7Z692 300 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms