RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 TRNT1Q96Q11 434 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 FAM173AQ9BQD7 235 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 IL1RL2Q9HB29 575 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 EXOSC3Q9NQT5 275 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 EXD2Q9NVH0 621 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 STMN3Q9NZ72 180 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 TP53TG5Q9Y2B4 290 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 CHCHD2Q9Y6H1 151 aaPredicted RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 GLOD5A6NK44 160 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ABCD3P28288 659 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 GAS1P54826 345 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 TRMT12Q53H54 448 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 KRTCAP3Q53RY4 240 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 NHSL2Q5HYW2 709 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 OR4F3Q6IEY1 312 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 NPSR1Q6W5P4 371 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 OR4N5Q8IXE1 308 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 PRSS58Q8IYP2 241 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 PCYOX1LQ8NBM8 494 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 OR4A15Q8NGL6 344 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 TMEM125Q96AQ2 219 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 CIDECQ96AQ7 238 aaPredicted RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 SLC35G5Q96KT7 338 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 CNPPD1Q9BV87 410 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ITPAQ9BY32 194 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ZNF350Q9GZX5 532 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 SDHAF3Q9NRP4 125 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 GIMAP2Q9UG22 337 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 CBLCQ9ULV8 474 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 CAPN7Q9Y6W3 813 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 APC2O95996 2303 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 NCOR2Q9Y618 2525 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 A0A087WZY1 265 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 IGHV3-20A0A0C4DH32 117 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 A8MVJ9 347 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 SUV39H1O43463 412 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 PRKNO60260 465 aaPredicted RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 HNRNPCL1O60812 293 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 C6orf47O95873 294 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 WDPCPO95876 746 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 IGHG3P01860 377 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 SSTR4P31391 388 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 GPC1P35052 558 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 CD96P40200 585 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 MVDP53602 400 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 KLF10Q13118 480 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 TRMT5Q32P41 509 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 SLC6A19Q695T7 634 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 NXNQ6DKJ4 435 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 FAAH2Q6GMR7 532 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 TMEM107Q6UX40 140 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 LRRC74BQ6ZQY2 392 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 SERPINA11Q86U17 422 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 GRAMD2AQ8IUY3 354 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 FAM71CQ8NEG0 241 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 THAP3Q8WTV1 239 aaPredicted RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 PPWD1Q96BP3 646 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 CMTM5Q96DZ9 223 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 TEX37Q96LM6 180 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 PRM3Q9NNZ6 103 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ACKR4Q9NPB9 350 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 HPF1Q9NWY4 346 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 MED13Q9UHV7 2174 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 URB1O60287 2271 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 A0A0G2JND7 137 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 RNF103-CHMP3A0A140T963 221 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ALG1L2C9J202 215 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 RFXANKO14593 260 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ADAM10O14672 748 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 KIAA0513O60268 411 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 FADS1O60427 444 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 HCN1O60741 890 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 THBS1P07996 1170 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ACP2P11117 423 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 CLK3P49761 638 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 MNAT1P51948 309 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 POU6F2P78424 691 aaPredicted RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 OR1C1Q15619 314 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 LTB4RQ15722 352 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 FXNQ16595 210 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 RUNDC3AQ59EK9 446 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 GKAP1Q5VSY0 366 aaPredicted RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 SLC22A10Q63ZE4 541 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ERICH5Q6P6B1 374 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 DLEU7Q6UYE1 221 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 GK5Q6ZS86 529 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 CCDC80Q76M96 950 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ZNF551Q7Z340 670 aaPredicted RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 C6orf120Q7Z4R8 191 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ARHGAP24Q8N264 748 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 FADS6Q8N9I5 356 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ZNF527Q8NB42 609 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ARSGQ96EG1 525 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 HOPXQ9BPY8 73 aaPredicted RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 NXF5Q9H1B4 397 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 ZDHHC11Q9H8X9 412 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 ZCCHC3Q9NUD5 404 aaKnown RBP6.93□□□□□ -1.3
USP16-204ENST00000399976 GID8Q9NWU2 228 aa6.93□□□□□ -1.3
USP16-204ENST00000399976 FAF1Q9UNN5 650 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms