RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SHFQ7M4L6 423 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 PRICKLE2Q7Z3G6 844 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 CAMKK1Q8N5S9 505 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 OR52P1PQ8NH57 321 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 SMARCD2Q92925 531 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 C16orf58Q96GQ5 468 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 MACROD1Q9BQ69 325 aa24.02■■□□□ 1.44
COL13A1-203ENST00000398969 DNMT3AQ9Y6K1 912 aaPredicted RBP24.02■■□□□ 1.44
COL13A1-203ENST00000398969 CCDC182A6NF36 153 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 FAM170BA6NMN3 283 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 CENPXA8MT69 81 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 GABRA5P31644 462 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 CD79BP40259 229 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 MAP4K2Q12851 820 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 TMEM35AQ53FP2 167 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 ZNF628Q5EBL2 1059 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 SLC35F1Q5T1Q4 408 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 C6orf183Q5T699 404 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 ZNF730Q6ZMV8 503 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 RDH10Q8IZV5 341 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 OR2A1Q8NGT9 310 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 AP3S1Q92572 193 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 KIAA1143Q96AT1 154 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-203ENST00000398969 CNRIP1Q96F85 164 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-203ENST00000398969 HDAC8Q9BY41 377 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 XKR8Q9H6D3 395 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 ANKRA2Q9H9E1 313 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 A0A1W2PR48 441 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 IGLON5A6NGN9 336 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 KDM4EB2RXH2 506 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-203ENST00000398969 BCL6P41182 706 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 MLF2Q15773 248 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-203ENST00000398969 WSCD2Q2TBF2 565 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 PYDC2Q56P42 97 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 C1QTNF12Q5T7M4 302 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 C11orf74Q86VG3 221 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 CCDC116Q8IYX3 515 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 OR8K5Q8NH50 307 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 CAMK1GQ96NX5 476 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 SLC38A2Q96QD8 506 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 ARHGAP9Q9BRR9 750 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 YIPF2Q9BWQ6 316 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 ZDHHC4Q9NPG8 344 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 CNIH4Q9P003 139 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 ASB4Q9Y574 426 aa24.01■■□□□ 1.43
COL13A1-203ENST00000398969 TTC36A6NLP5 189 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 FGF9P31371 208 aaPredicted RBP24■■□□□ 1.43
COL13A1-203ENST00000398969 MRPS15P82914 257 aaKnown RBP24■■□□□ 1.43
COL13A1-203ENST00000398969 TSPAN31Q12999 210 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 ZIC1Q15915 447 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 PIP5KL1Q5T9C9 394 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 PPP2R2DQ66LE6 453 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 VWA5B2Q8N398 1253 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 RAB42Q8N4Z0 105 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 ZNF485Q8NCK3 441 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 INSM2Q96T92 566 aaPredicted RBP24■■□□□ 1.43
COL13A1-203ENST00000398969 GSTK1Q9Y2Q3 226 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 ATG4BQ9Y4P1 393 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 C5orf42Q9H799 3197 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 B4DXG7 233 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 C1QTNF3-AMACRE9PGA6 284 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 FRS3O43559 492 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 NTN1O95631 604 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 SSTR4P31391 388 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 IFNGR2P38484 337 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 ZNF311Q5JNZ3 666 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 CD200R1LQ6Q8B3 271 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 TMEM107Q6UX40 140 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 RASSF6Q6ZTQ3 369 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 FAM20CQ8IXL6 584 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 TTLQ8NG68 377 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 RAB7BQ96AH8 199 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 C12orf66Q96MD2 445 aa24■■□□□ 1.43
COL13A1-203ENST00000398969 GPR55Q9Y2T6 319 aaPredicted RBP24■■□□□ 1.43
COL13A1-203ENST00000398969 ANTXRLA6NF34 631 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 A6NL46 340 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 SYT5O00445 386 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 ERI3O43414 337 aaKnown RBP23.99■■□□□ 1.43
COL13A1-203ENST00000398969 NFATC1O95644 943 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 CAV3P56539 151 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 MLLT1Q03111 559 aaPredicted RBP23.99■■□□□ 1.43
COL13A1-203ENST00000398969 TRAM2Q15035 370 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 CLEC12AQ5QGZ9 265 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 PRAMEF8Q5VWM4 474 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 PRAMEF7Q5VXH5 474 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 TYW3Q6IPR3 259 aaKnown RBP23.99■■□□□ 1.43
COL13A1-203ENST00000398969 ZFP41Q8N8Y5 198 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 OR56A1Q8NGH5 318 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 MS4A6EQ96DS6 147 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 FAM46AQ96IP4 442 aaKnown RBP23.99■■□□□ 1.43
COL13A1-203ENST00000398969 ARHGDIGQ99819 225 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 SLX1AQ9BQ83 275 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 SEMA4GQ9NTN9 838 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 A0A1W2PS29 197 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 PLA2G10O15496 165 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 C8orf89P0DMQ9 161 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 HIST1H1TP22492 207 aaPredicted RBP23.99■■□□□ 1.43
COL13A1-203ENST00000398969 MADCAM1Q13477 382 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 SLC7A6Q92536 515 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 DIO2Q92813 273 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms