RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 RTL10Q7L3V2 364 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 SLC44A3Q8N4M1 653 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 KCT2Q8NC54 265 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 OR4A15Q8NGL6 344 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 FANK1Q8TC84 345 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 KCNJ9Q92806 393 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 SENP5Q96HI0 755 aaPredicted RBP9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 HHIPQ96QV1 700 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 OR2M2Q96R28 347 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 DPYSL5Q9BPU6 564 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 SLC29A3Q9BZD2 475 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 NOSIPQ9Y314 301 aaKnown RBP9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 RPL36Q9Y3U8 105 aaKnown RBP9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 SPIN1Q9Y657 262 aaPredicted RBP9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 DMXL1Q9Y485 3027 aa9.56□□□□□ -0.88
HMGCLL1-205ENST00000398661 A0A1B0GVI7 797 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 CASKO14936 926 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 MMP20O60882 483 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 GCM2O75603 506 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 LALBAP00709 142 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 EGFP01133 1207 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 PDYNP01213 254 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 OPN1SWP03999 348 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 BPIP17213 487 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 HOXA1P49639 335 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 AP1S2P56377 157 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 DCDC1P59894 354 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SNRPD1P62314 119 aaKnown RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ZNF91Q05481 1191 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 IFI44LQ53G44 452 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ZRANB3Q5FWF4 1079 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 NHLRC3Q5JS37 347 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 TMEM201Q5SNT2 666 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ALG1LQ6GMV1 187 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 QSOX2Q6ZRP7 698 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 RASSF6Q6ZTQ3 369 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ASB18Q6ZVZ8 466 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 LAPTM4BQ86VI4 370 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 AQP11Q8NBQ7 271 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ATOH1Q92858 354 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 MAL2Q969L2 176 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 C12orf57Q99622 126 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 TSSK6Q9BXA6 273 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 CHST8Q9H2A9 424 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SUV39H2Q9H5I1 410 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 BRD7Q9NPI1 651 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 DLL4Q9NR61 685 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 HCN3Q9P1Z3 774 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 B4GALT6Q9UBX8 382 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 FZD4Q9ULV1 537 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 PPIEQ9UNP9 301 aaKnown RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 GSTK1Q9Y2Q3 226 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 AP1M2Q9Y6Q5 423 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ABCA7Q8IZY2 2146 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 TRPM6Q9BX84 2022 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 MEIKINA0A087WXM9 373 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 HNRNPCL2B2RXH8 293 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 J3KTA2 159 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 STK25O00506 426 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SLC30A4O14863 429 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 LRRTM2O43300 516 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 GASTP01350 101 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 EPOP01588 193 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SYPP08247 313 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 PCGF2P35227 344 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 RECQLP46063 649 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 TTPAP49638 278 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SMSP52788 366 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 VSX2P58304 361 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 POLR2GP62487 172 aaKnown RBP eCLIP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 FOXD4Q12950 439 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 MTAPQ13126 283 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 C6orf132Q5T0Z8 1188 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 RGS7BPQ6MZT1 257 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 CRTC1Q6UUV9 634 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 Q6ZS52 159 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 Q6ZVL8 140 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 PM20D2Q8IYS1 436 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 CLECL1Q8IZS7 167 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 CLRN3Q8NCR9 226 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 OR8K3Q8NH51 312 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 AHCYL2Q96HN2 611 aaKnown RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 CXorf58Q96LI9 332 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SLC6A18Q96N87 628 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 ERMAPQ96PL5 475 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 EGFL8Q99944 293 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 NTMT1Q9BV86 223 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 TPT1P8Q9HAU6 139 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 NUDT15Q9NV35 164 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 MED9Q9NWA0 146 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 KCTD5Q9NXV2 234 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SLC39A1Q9NY26 324 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 WWOXQ9NZC7 414 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 MARK1Q9P0L2 795 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SCP2D1Q9UJQ7 156 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 SF3B6Q9Y3B4 125 aaKnown RBP9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 PIAS3Q9Y6X2 628 aa9.55□□□□□ -0.88
HMGCLL1-205ENST00000398661 PIPSLA2A3N6 862 aa9.54□□□□□ -0.88
HMGCLL1-205ENST00000398661 A8MXK9 166 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms