RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 DOCK1Q14185 1865 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACOT8O14734 319 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 GATBO75879 557 aaKnown RBP13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 GNAO1P09471 354 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 EIF1AXP47813 144 aaKnown RBP13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 CXCR4P61073 352 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 HSD17B12Q53GQ0 312 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMEM225Q6GV28 225 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 CEACAM19Q7Z692 300 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 KLBQ86Z14 1044 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 VRK3Q8IV63 474 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 GRPEL2Q8TAA5 225 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 FAM210AQ96ND0 272 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 FRMD6Q96NE9 622 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 LPAR4Q99677 370 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 SMURF1Q9HCE7 757 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 CPNE7Q9UBL6 633 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 A0A1B0GVI7 797 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 SDC3O75056 442 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 PLGP00747 810 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 JMJD7P0C870 316 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 S1PR1P21453 382 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 NCS1P62166 190 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 YPEL5P62699 121 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACTA2P62736 377 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACTG2P63267 376 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ODF4Q2M2E3 257 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 MS4A15Q8N5U1 240 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 SAMD12Q8N8I0 201 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 GATAD2BQ8WXI9 593 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 PRRC1Q96M27 445 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TUBB1Q9H4B7 451 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 EXTL2Q9UBQ6 330 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TAPBPO15533 448 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 RDH16O75452 317 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 CDKN2CP42773 168 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 SOX2P48431 317 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 BCL7AQ4VC05 210 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 SH2D5Q6ZV89 423 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 BCL7CQ8WUZ0 217 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TTYH1Q9H313 450 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 SRA1Q9HD15 236 aaKnown RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TAS2R10Q9NYW0 307 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TRAPPC6AO75865 159 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 LCKP06239 509 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 SPARCP09486 303 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ITGAMP11215 1152 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 STT3AP46977 705 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 PLGLB1Q02325 96 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMEM52BQ4KMG9 183 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 C6orf132Q5T0Z8 1188 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 IQCF1Q8N6M8 205 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 DNAJA4Q8WW22 397 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 MROQ9BYG7 248 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZBTB20Q9HC78 741 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 EIF1AYO14602 144 aaKnown RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 MAGEA8P43361 318 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF77Q15935 545 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 FBXO42Q6P3S6 717 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 GDPGP1Q6ZNW5 385 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 LIMS2Q7Z4I7 341 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMEM17Q86X19 198 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMEM151BQ8IW70 566 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 CCDC36Q8IYA8 594 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 LILRA2Q8N149 483 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ANKK1Q8NFD2 765 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 THAP3Q8WTV1 239 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 NPLQ9BXD5 320 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 STRADBQ9C0K7 418 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 CHMP1AQ9HD42 196 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 ASB6Q9NWX5 421 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 PPP4R1LQ9P1A2 415 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 DKKL1Q9UK85 242 aa13.44□□□□□ -0.26
PCDHGA11-201ENST00000398587 SH3PXD2BA1X283 911 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 PRKCAP17252 672 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 IRS1P35568 1242 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 FRMPD2BQ6IN97 320 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 PLBD1Q6P4A8 553 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 SPARTQ8N0X7 666 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF619Q8N2I2 560 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMEM102Q8N9M5 508 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 WBP2Q969T9 261 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 RNF121Q9H920 327 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 POT1Q9NUX5 634 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 INTS6Q9UL03 887 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 CLEC4EQ9ULY5 219 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 A0A0A6YYC8 382 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 I3L1I5 382 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF181Q2M3W8 571 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 XKR7Q5GH72 579 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 HENMT1Q5T8I9 393 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 TCEAL6Q6IPX3 200 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF782Q6ZMW2 699 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 PTRH1Q86Y79 214 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 MCATQ8IVS2 390 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 LMNTD1Q8N9Z9 388 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR52E2Q8NGJ4 325 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms