RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 POM121BA6NF01 834 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ASGR2P07307 311 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 AK4P27144 223 aaPredicted RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TEAD1P28347 426 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CSTF2P33240 577 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MAN2A2P49641 1150 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CLDN2P57739 230 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 GINS1Q14691 196 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LTB4RQ15722 352 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ITPRIPL2Q3MIP1 535 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 DESI1Q6ICB0 168 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SLC48A1Q6P1K1 146 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 RD3Q7Z3Z2 195 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 KAT2AQ92830 837 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 KCNS3Q9BQ31 491 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 C6orf106Q9H6K1 298 aaPredicted RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 STMN3Q9NZ72 180 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D29Q9UFV1 150 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 KCNN3Q9UGI6 736 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CES1P1Q9UKY3 287 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LSM2Q9Y333 95 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MTRF1O75570 445 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PPP2CBP62714 309 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PPP2CAP67775 309 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SPHARQ15513 63 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TMEM201Q5SNT2 666 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TMEM64Q6YI46 380 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 UBE2Q1Q7Z7E8 422 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 GATAD2AQ86YP4 633 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MORN4Q8NDC4 146 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CNPPD1Q9BV87 410 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 BCL2L10Q9HD36 194 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SCN2AQ99250 2005 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 BTN3A3O00478 584 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PLRG1O43660 514 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 FHP07954 510 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 HBQ1P09105 142 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 F3P13726 295 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CSNK2A2P19784 350 aaPredicted RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 AHRP35869 848 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ADPRHP54922 357 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 BTN3A2P78410 334 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CDK10Q15131 360 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 VRK2Q86Y07 508 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CCDC28AQ8IWP9 274 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OR7D2Q96RA2 312 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SPATA5L1Q9BVQ7 753 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PLA2G12AQ9BZM1 189 aa17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 GPR55Q9Y2T6 319 aaPredicted RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 RPL36Q9Y3U8 105 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-202ENST00000397827 H0Y8X5 98 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CACNB4O00305 520 aaPredicted RBP17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SLITRK5O94991 958 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 APOL3O95236 402 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SCG5P05408 212 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 GIPRP48546 466 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TMEM196Q5HYL7 178 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 BHLHB9Q6PI77 547 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CADM2Q8N3J6 435 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PRRC1Q96M27 445 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SNX18Q96RF0 628 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PBX4Q9BYU1 374 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 EGLN3Q9H6Z9 239 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 A3GALT2U3KPV4 340 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ERVH48-1M5A8F1 160 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CTDSP2O14595 271 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PROM1O43490 865 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CMPK1P30085 196 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ABATP80404 500 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 HOXC5Q00444 222 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 RHAGQ02094 409 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TIMM50Q3ZCQ8 353 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SLC51BQ86UW2 128 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 NUP43Q8NFH3 380 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TRMT61AQ96FX7 289 aaKnown RBP17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LRR1Q96L50 414 aa17.22■□□□□ 0.35
CHRFAM7A-202ENST00000397827 RFXAPO00287 272 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MPIP34949 423 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MLLT1Q03111 559 aaPredicted RBP17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 NCF4Q15080 339 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ZNF311Q5JNZ3 666 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SYCE2Q6PIF2 218 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OR56A1Q8NGH5 318 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CCL4L1Q8NHW4 92 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LCN9Q8WX39 176 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 COL26A1Q96A83 441 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ELP4Q96EB1 424 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 POLR2J2Q9GZM3 115 aaKnown RBP17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 NUAK2Q9H093 628 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SLC38A1Q9H2H9 487 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 A0A087WUU8 490 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 A0A0G2JPF8 293 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PRSS38A1L453 326 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 HNRNPCL2B2RXH8 293 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 HNRNPCL3B7ZW38 293 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 HNRNPCL4P0DMR1 293 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ALOX12P18054 663 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SOX6P35712 828 aa17.21■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PRR5P85299 388 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms