RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CDC14CA4D256 554 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 MGRN1O60291 552 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 CD63P08962 238 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 SDHBP21912 280 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 MYBPC3Q14896 1274 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 INTS11Q5TA45 600 aaKnown RBP19.66■□□□□ 0.74
CPNE1-204ENST00000397443 ZCCHC12Q6PEW1 402 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 NPSR1Q6W5P4 371 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 C9orf40Q8IXQ3 194 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 CANT1Q8WVQ1 401 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 NKD1Q969G9 470 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 LIN28AQ9H9Z2 209 aaKnown RBP19.66■□□□□ 0.74
CPNE1-204ENST00000397443 GIN1Q9NXP7 522 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 AKAP13Q12802 2813 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 TCRBV3S1A0A5B6 114 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 AQP12BA6NM10 295 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 M0QX08 132 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 PGM3O95394 542 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 CLCN2P51788 898 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 CRISP3P54108 245 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 HPCAP84074 193 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 RHDQ02161 417 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 AQP12AQ8IXF9 295 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 SMYD1Q8NB12 490 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 NFAM1Q8NET5 270 aaPredicted RBP19.65■□□□□ 0.74
CPNE1-204ENST00000397443 THAP3Q8WTV1 239 aaPredicted RBP19.65■□□□□ 0.74
CPNE1-204ENST00000397443 TPD52L3Q96J77 140 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 LMF2Q9BU23 707 aaKnown RBP19.65■□□□□ 0.74
CPNE1-204ENST00000397443 B3GNT4Q9C0J1 378 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 QRSL1Q9H0R6 528 aaKnown RBP19.65■□□□□ 0.74
CPNE1-204ENST00000397443 DUSP22Q9NRW4 184 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 DCAF13Q9NV06 445 aaKnown RBP19.65■□□□□ 0.74
CPNE1-204ENST00000397443 FBXO34Q9NWN3 711 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 KLK13Q9UKR3 277 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 OR10H1Q9Y4A9 318 aa19.65■□□□□ 0.74
CPNE1-204ENST00000397443 DHRS12A0PJE2 317 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 MASP2O00187 686 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 FCMRO60667 390 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 MMP11P24347 488 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 MAP3K8P41279 467 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 MAGEA8P43361 318 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 CRYBA2P53672 197 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 CAMK2BQ13554 666 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 RCN1Q15293 331 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 EXOSC6Q5RKV6 272 aaKnown RBP19.64■□□□□ 0.74
CPNE1-204ENST00000397443 DCST2Q5T1A1 773 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 KIRREL2Q6UWL6 708 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 STACQ99469 402 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 IL17BQ9UHF5 180 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 MKLN1Q9UL63 735 aa19.64■□□□□ 0.74
CPNE1-204ENST00000397443 C2orf92A0A1B0GVN3 265 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 C21orf140B9A014 251 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 PRKD3O94806 890 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 NKX2-2O95096 273 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 AGR2O95994 175 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 C8BP07358 591 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 CYC1P08574 325 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 CT45A8P0DMV1 189 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 CT45A9P0DMV2 189 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 GPR143P51810 404 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 POU6F2P78424 691 aaPredicted RBP19.64■□□□□ 0.73
CPNE1-204ENST00000397443 CHRNEQ04844 493 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 PCOLCEQ15113 449 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 CYP27C1Q4G0S4 372 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 CT45A2Q5DJT8 189 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 HLA-DQA1Q5Y7H0 255 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 SLC29A4Q7RTT9 530 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 APCDD1LQ8NCL9 501 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 TAMM41Q96BW9 452 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 COL21A1Q96P44 957 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 LMF1Q96S06 567 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 NXF5Q9H1B4 397 aaKnown RBP19.64■□□□□ 0.73
CPNE1-204ENST00000397443 Q9N2J8 555 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 THSD1Q9NS62 852 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 ZNF223Q9UK11 482 aaPredicted RBP19.64■□□□□ 0.73
CPNE1-204ENST00000397443 LIPT1Q9Y234 373 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 PCDHGB3Q9Y5G1 929 aa19.64■□□□□ 0.73
CPNE1-204ENST00000397443 IGHV1-45A0A0A0MS14 117 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 TRBV11-1A0A0K0K1C0 115 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 TRABD2BA6NFA1 517 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 TPST1O60507 370 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 MT-ND1P03886 318 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 COX6A1P12074 109 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 PSMA4P25789 261 aaKnown RBP19.63■□□□□ 0.73
CPNE1-204ENST00000397443 PCBP3P57721 371 aaKnown RBP19.63■□□□□ 0.73
CPNE1-204ENST00000397443 SLC26A5P58743 744 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 TXNL4AP83876 142 aaKnown RBP19.63■□□□□ 0.73
CPNE1-204ENST00000397443 IL10RAQ13651 578 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 EBPQ15125 230 aaKnown RBP19.63■□□□□ 0.73
CPNE1-204ENST00000397443 BTBD16Q32M84 506 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 CYBRD1Q53TN4 286 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 HEPHL1Q6MZM0 1159 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 VTCN1Q7Z7D3 282 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 SLC30A8Q8IWU4 369 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 C10orf67Q8IYJ2 551 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 OR11G2Q8NGC1 345 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 TRNT1Q96Q11 434 aaKnown RBP19.63■□□□□ 0.73
CPNE1-204ENST00000397443 SDF2Q99470 211 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 BTBD2Q9BX70 525 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 S100A14Q9HCY8 104 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms