RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RIF1Q5UIP0 2472 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 SAGE2PA6NJ88 616 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ZNF682O95780 498 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 C1QCP02747 245 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ITIH1P19827 911 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 PPICP45877 212 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 PGDP52209 483 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC37A1P57057 533 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 POU6F2P78424 691 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 NHLH1Q02575 133 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 KCNC4Q03721 635 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 CYP27C1Q4G0S4 372 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 FAM198BQ6UWH4 519 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SPPL2AQ8TCT8 520 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ADAMTS14Q8WXS8 1223 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC35A4Q96G79 324 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 CENPNQ96H22 339 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 OSBPL10Q9BXB5 764 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ZNF350Q9GZX5 532 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SAP130Q9H0E3 1048 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 VCXQ9H320 206 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 AGPAT4Q9NRZ5 378 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SEC14L3Q9UDX4 400 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ZNF232Q9UNY5 417 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 LOC102723996A0A087X1L8 192 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 A0A1W2PQ72 361 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 A8MVJ9 347 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SYT5O00445 386 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ACOX3O15254 700 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 PEX1O43933 1283 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 DDAH2O95865 285 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 LDLRP01130 860 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 THBS1P07996 1170 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ACP2P11117 423 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ZNF28P17035 718 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SOX11P35716 441 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 CASP9P55211 416 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 EXOSC7Q15024 291 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ATP6AP1Q15904 470 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 DUSP5Q16690 384 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 IFI44LQ53G44 452 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 DGAT2L6Q6ZPD8 337 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC29A4Q7RTT9 530 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ASCL5Q7RTU5 278 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ANKRD37Q7Z713 158 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 PEX5LQ8IYB4 626 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 B3GNT7Q8NFL0 401 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 C16orf52Q8NHV5 167 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 GPR151Q8TDV0 419 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ZNF721Q8TF20 911 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 NR4A3Q92570 626 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 ZNF347Q96SE7 839 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SEMA4CQ9C0C4 833 aa17.69■□□□□ 0.42
TSPAN4-204ENST00000397404 SCN2AQ99250 2005 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 DLL1O00548 723 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 MFN2O95140 757 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 H6PDO95479 791 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 SEMG1P04279 462 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 FABP3P05413 133 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 DRD5P21918 477 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 PRKAR1BP31321 381 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 VHLP40337 213 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 ETV5P41161 510 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 PSG6Q00889 435 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 SYPL1Q16563 259 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 EIPR1Q53HC9 387 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 DCST2Q5T1A1 773 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 CPEB2Q7Z5Q1 589 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 LAPTM4BQ86VI4 370 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 GALNT6Q8NCL4 622 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 PROX1Q92786 737 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 TP53INP1Q96A56 240 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 HSPBAP1Q96EW2 488 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 HSH2DQ96JZ2 352 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 SEPHS2Q99611 448 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 YIPF4Q9BSR8 244 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 PINK1Q9BXM7 581 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC38A1Q9H2H9 487 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 SOX17Q9H6I2 414 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 POLR1BQ9H9Y6 1135 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 THSD1Q9NS62 852 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 DNAJB9Q9UBS3 223 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 NKX1-2Q9UD57 310 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 RIMS3Q9UJD0 308 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 CNOT11Q9UKZ1 510 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 WDR45Q9Y484 360 aa17.68■□□□□ 0.42
TSPAN4-204ENST00000397404 KNTC1P50748 2209 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 FRG2CA6NGY1 282 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 C9orf172C9J069 976 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 GCM2O75603 506 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC34A2O95436 690 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 CAPNS1P04632 268 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 ALPPP05187 535 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 ATP6V1C1P21283 382 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 SSTR4P31391 388 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 GABRA3P34903 492 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 FOLR3P41439 243 aa17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 PTDSS1P48651 473 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-204ENST00000397404 RPS15P62841 145 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms