RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 SPRY4Q9C004 299 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 AKIRIN1Q9H9L7 192 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 PRDM9Q9NQV7 894 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 PTTG2Q9NZH5 202 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CTSFQ9UBX1 484 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 KLK13Q9UKR3 277 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 BAG5Q9UL15 447 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 PADI1Q9ULC6 663 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 ANGPT4Q9Y264 503 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 U3KQV3 271 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 LOC100130705A0A1B0GUX0 176 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 CDRT15L2A8MXV6 281 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 STMND1H3BQB6 276 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 CLDN4O14493 209 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 PGRMC2O15173 223 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 B4GALT2O60909 372 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 JRKO75564 520 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 SEC24DO94855 1032 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 CDH2P19022 906 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 PRKACGP22612 351 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 CD82P27701 267 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 RYKP34925 604 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 MAGEA8P43361 318 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 DAPP51397 102 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 ARHGDIAP52565 204 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 GABARAPL2P60520 117 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 KEAP1Q14145 624 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 ERV3-1Q14264 604 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 RTP5Q14D33 572 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 IFI44LQ53G44 452 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 MFSD4BQ5TF39 518 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 MLIPQ5VWP3 458 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 LCN10Q6JVE6 187 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 SLC48A1Q6P1K1 146 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 FAM199XQ6PEV8 388 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 ANGPTL8Q6UXH0 198 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 TIPARPQ7Z3E1 657 aaKnown RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF595Q8IYB9 648 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 ESX1Q8N693 406 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 CHDHQ8NE62 594 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 TANKQ92844 425 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 UCN3Q969E3 161 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 EXOSC8Q96B26 276 aaKnown RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 NXPE2Q96DL1 559 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 TMEM121BQ9BXQ6 578 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 REEP1Q9H902 201 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 C14orf105Q9NVL8 296 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 NDUFAF4Q9P032 175 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 C5AR2Q9P296 337 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 PSME2Q9UL46 239 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 SAMHD1Q9Y3Z3 626 aaKnown RBP13.92□□□□□ -0.18
CAPN3-207ENST00000397200 ORC6Q9Y5N6 252 aa13.92□□□□□ -0.18
CAPN3-207ENST00000397200 IGLV3-12A0A075B6K2 115 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 CDC123O75794 336 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 DXOO77932 396 aaKnown RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 DIRAS1O95057 198 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 AQP1P29972 269 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 PPP2R1BP30154 601 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 PRIM2P49643 509 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 CDK9P50750 372 aaKnown RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 SH3BGRP55822 239 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 ISL1P61371 349 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 VWA2Q5GFL6 755 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 LAIR2Q6ISS4 152 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF773Q6PK81 442 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF517Q6ZMY9 492 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 NLGN4XQ8N0W4 816 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 TMEM52Q8NDY8 209 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 NLGN4YQ8NFZ3 816 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 STT3BQ8TCJ2 826 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF566Q969W8 418 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 TPD52L3Q96J77 140 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF347Q96SE7 839 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 SCNM1Q9BWG6 230 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 TGIF2Q9GZN2 237 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 ASCL3Q9NQ33 180 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 PRTFDC1Q9NRG1 225 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 THUMPD1Q9NXG2 353 aaKnown RBP13.91□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF451Q9Y4E5 1061 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 PCDHGB3Q9Y5G1 929 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
CAPN3-207ENST00000397200 TRABD2BA6NFA1 517 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 PRAMEF25A6NGN4 478 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 A8MVJ9 347 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ADAMDEC1O15204 470 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 BRINP1O60477 761 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ERAL1O75616 437 aaKnown RBP13.9□□□□□ -0.18
CAPN3-207ENST00000397200 IFNA14P01570 189 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ZGLP1P0C6A0 271 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 CRHBPP24387 322 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ELK4P28324 431 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 HSD17B7P56937 341 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 SLC13A2Q13183 592 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 MINDY4Q4G0A6 757 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 FAM198BQ6UWH4 519 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 TMEM64Q6YI46 380 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 MED25Q71SY5 747 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ARMC8Q8IUR7 673 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms