RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 STMN2Q93045 179 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 NCLNQ969V3 563 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 VN1R1Q9GZP7 353 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 CXorf21Q9HAI6 301 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 EQTNQ9NQ60 294 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 ACTR3BQ9P1U1 418 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 FAF1Q9UNN5 650 aaPredicted RBP12.32□□□□□ -0.44
SEC13-209ENST00000397117 USP22Q9UPT9 525 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 FARSAQ9Y285 508 aaKnown RBP12.32□□□□□ -0.44
SEC13-209ENST00000397117 CRYBG3Q68DQ2 2970 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 LRBAP50851 2863 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 SCN2AQ99250 2005 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 A0A087WV62 115 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 WIPF3A6NGB9 483 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 ENO4A6NNW6 628 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 UPK1AO00322 258 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 ACOT8O14734 319 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 ARPC2O15144 300 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 ENTPD5O75356 428 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 HMGN2P05204 90 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 IFI6P09912 130 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 MATN1P21941 496 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 GALNSP34059 522 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 MAGEA8P43361 318 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 KHKP50053 298 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 GZMMP51124 257 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 MVDP53602 400 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 DSTNP60981 165 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 RPS26P62854 115 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 MAP4K2Q12851 820 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 IL10RAQ13651 578 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 LASP1Q14847 261 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 EIF2S3LQ2VIR3 472 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 TRMT12Q53H54 448 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 TNFAIP8L2Q6P589 184 aaPredicted RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 FAM111BQ6SJ93 734 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 CYP2R1Q6VVX0 501 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 ZNF517Q6ZMY9 492 aaPredicted RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 SHISA6Q6ZSJ9 500 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 LAPTM4BQ86VI4 370 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 C10orf111Q8N326 155 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 OR2L13Q8N349 312 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 Q8NA96 180 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 FIG4Q92562 907 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 JADE3Q92613 823 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 TSLPQ969D9 159 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 MS4A4EQ96PG1 132 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 ING2Q9H160 280 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 SLC26A1Q9H2B4 701 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 SOX17Q9H6I2 414 aaPredicted RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 PNO1Q9NRX1 252 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 GPATCH2Q9NW75 528 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 THUMPD1Q9NXG2 353 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 MAT2BQ9NZL9 334 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 NTMQ9P121 344 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 NXT1Q9UKK6 140 aaKnown RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 C19orf53Q9UNZ5 99 aaPredicted RBP12.31□□□□□ -0.44
SEC13-209ENST00000397117 PCDHGB7Q9Y5F8 929 aa12.31□□□□□ -0.44
SEC13-209ENST00000397117 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 IGKV3D-11A0A0A0MRZ8 115 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 A1L4Q6 167 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 TMEM247A6NEH6 219 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ARGFXA6NJG6 315 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 PLOD3O60568 738 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ATP6V1G2O95670 118 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 NCK1P16333 377 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 GGT1P19440 569 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ERFP50548 548 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 RPS15P62841 145 aaKnown RBP12.3□□□□□ -0.44
SEC13-209ENST00000397117 TXNL4AP83876 142 aaKnown RBP12.3□□□□□ -0.44
SEC13-209ENST00000397117 ZNF267Q14586 743 aaPredicted RBP12.3□□□□□ -0.44
SEC13-209ENST00000397117 NKG7Q16617 165 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 VMACQ2NL98 169 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
SEC13-209ENST00000397117 GLYATQ6IB77 296 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 LCN10Q6JVE6 187 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 JMJD6Q6NYC1 403 aaPredicted RBP12.3□□□□□ -0.44
SEC13-209ENST00000397117 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ZZZ3Q8IYH5 903 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 C11orf65Q8NCR3 313 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 PLPP5Q8NEB5 264 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ADAMTS17Q8TE56 1095 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 DOK4Q8TEW6 326 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 METTL21AQ8WXB1 218 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 CHST8Q9H2A9 424 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 WDR54Q9H977 334 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ANKRA2Q9H9E1 313 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ADAP2Q9NPF8 381 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 ZNF451Q9Y4E5 1061 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 CLDN16Q9Y5I7 305 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 CLCA3PQ9Y6N3 262 aa12.3□□□□□ -0.44
SEC13-209ENST00000397117 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 VSTM2BA6NLU5 285 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 C17orf105B2RV13 164 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 IDSB3KWA1 339 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 CXCR6O00574 342 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 COQ9O75208 318 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 TNFRSF21O75509 655 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 NUDT7P0C024 238 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms