RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 CSF3RQ99062 836 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 DNAJB12Q9NXW2 375 aaKnown RBP12.63□□□□□ -0.39
SEC13-205ENST00000397101 KCMF1Q9P0J7 381 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 UTS2RQ9UKP6 389 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 ZNF780BQ9Y6R6 833 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 ANGPT2O15123 496 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 PGRMC2O15173 223 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 CFLARO15519 480 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 CDC123O75794 336 aaPredicted RBP12.62□□□□□ -0.39
SEC13-205ENST00000397101 IL6P05231 212 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 FHP07954 510 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 COX4I1P13073 169 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 IL12AP29459 219 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 NTSP30990 170 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 PEX19P40855 299 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 MRPL19P49406 292 aaKnown RBP12.62□□□□□ -0.39
SEC13-205ENST00000397101 MEOX1P50221 254 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 DGKQP52824 942 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 MXRA7P84157 204 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 SLC13A2Q13183 592 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 DPY19L1Q2PZI1 675 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 FAM174BQ3ZCQ3 159 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 TIGD2Q4W5G0 525 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 SPANXN4Q5MJ08 99 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 OR4F3Q6IEY1 312 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 OR52E8Q6IFG1 317 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 SULF2Q8IWU5 870 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 POU5F2Q8N7G0 328 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 VPS37AQ8NEZ2 397 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 RP9Q8TA86 221 aaKnown RBP12.62□□□□□ -0.39
SEC13-205ENST00000397101 NUDT8Q8WV74 236 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 NRGNQ92686 78 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 TANKQ92844 425 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 UCN3Q969E3 161 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 MBD6Q96DN6 1003 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 SPDL1Q96EA4 605 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 OR52E6Q96RD3 313 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 DUSP26Q9BV47 211 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 RMND5AQ9H871 391 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 PRTFDC1Q9NRG1 225 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 LANCL2Q9NS86 450 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 ATP6V1HQ9UI12 483 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 L3MBTL1Q9Y468 752 aa12.62□□□□□ -0.39
SEC13-205ENST00000397101 OR2W5A6NFC9 320 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 ANKRD28O15084 1053 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 PDPK1O15530 556 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 CPSF4O95639 269 aaKnown RBP12.61□□□□□ -0.39
SEC13-205ENST00000397101 LAMP1P11279 417 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 PPP2R1BP30154 601 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 OR4D2P58180 307 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 PLIN5Q00G26 463 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 ID2Q02363 134 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 STX4Q12846 297 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 STX5Q13190 355 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 VPS26BQ4G0F5 336 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 EMC4Q5J8M3 183 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 ANXA8L1Q5VT79 327 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 SLC48A1Q6P1K1 146 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 BLOC1S3Q6QNY0 202 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 CCDC121Q6ZUS5 278 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 CAMKMTQ7Z624 323 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 BIVMQ86UB2 503 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 TREML1Q86YW5 311 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 OR4N5Q8IXE1 308 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 RIMKLAQ8IXN7 391 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 ZNF595Q8IYB9 648 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 OR4K14Q8NGD5 310 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC13-205ENST00000397101 VPS33AQ96AX1 596 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 TESCQ96BS2 214 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 NSL1Q96IY1 281 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 GSX1Q9H4S2 264 aaPredicted RBP12.61□□□□□ -0.39
SEC13-205ENST00000397101 ARL8BQ9NVJ2 186 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 TMEM45AQ9NWC5 275 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 TAGLN3Q9UI15 199 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 PCDHGB4Q9UN71 923 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 NDUFAF1Q9Y375 327 aa12.61□□□□□ -0.39
SEC13-205ENST00000397101 MYOCOSA0A1B0GUC4 107 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 WASHC1A8K0Z3 465 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 CYR61O00622 381 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 HS6ST1O60243 411 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 LDB3O75112 727 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 UBOX5O94941 541 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 ANP32DO95626 131 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 PGRP06401 933 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 EFNA1P20827 205 aaPredicted RBP12.6□□□□□ -0.39
SEC13-205ENST00000397101 DNASE1P24855 282 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 PRDX6P30041 224 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 GPC1P35052 558 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 FEN1P39748 380 aaKnown RBP12.6□□□□□ -0.39
SEC13-205ENST00000397101 CPA2P48052 419 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 ST13P50502 369 aaKnown RBP12.6□□□□□ -0.39
SEC13-205ENST00000397101 XKP51811 444 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 MANFP55145 182 aaKnown RBP12.6□□□□□ -0.39
SEC13-205ENST00000397101 NUP107P57740 925 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 PMPCAQ10713 525 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 KRT72Q14CN4 511 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 ZNF385BQ569K4 471 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 FAM180BQ6P0A1 224 aa12.6□□□□□ -0.39
SEC13-205ENST00000397101 CCDC71Q8IV32 467 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms