RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CCNYL3P0C7X3 344 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 FASP25445 335 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 SSTR4P31391 388 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 TRHRP34981 398 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-209ENST00000397036 PSPHP78330 225 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 PSG6Q00889 435 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 FUT5Q11128 374 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 NCF4Q15080 339 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 LRRC23Q53EV4 343 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-209ENST00000397036 ENPP6Q6UWR7 440 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 C6orf15Q6UXA7 325 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-209ENST00000397036 ANKRD37Q7Z713 158 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 ANKFN1Q8N957 763 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-209ENST00000397036 OR1N1Q8NGS0 311 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 C16orf52Q8NHV5 167 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 FBXO30Q8TB52 745 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 ZNF721Q8TF20 911 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 OIT3Q8WWZ8 545 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 SLC9A6Q92581 669 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 TAMM41Q96BW9 452 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 SDF2Q99470 211 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 CNPPD1Q9BV87 410 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 SLC38A1Q9H2H9 487 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 AKIRIN1Q9H9L7 192 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-209ENST00000397036 IL1RAPQ9NPH3 570 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 RIMS3Q9UJD0 308 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 BAG5Q9UL15 447 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 KCNE3Q9Y6H6 103 aa12.65□□□□□ -0.38
MCF2L-209ENST00000397036 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 SPAARA0A1B0GVQ0 90 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 A0A1W2PQ72 361 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 A8MVJ9 347 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 HRKO00198 91 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 BRINP1O60477 761 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 KLF7O75840 302 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-209ENST00000397036 IGHEP01854 428 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 CHRM4P08173 479 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 PPICP45877 212 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 PGDP52209 483 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 IGF2-ASQ6U949 168 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 C16orf62Q7Z3J2 963 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 FAM86B1Q8N7N1 296 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 GALNT6Q8NCL4 622 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 C17orf47Q8NEP4 570 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 FAM110BQ8TC76 370 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 SLC2A12Q8TD20 617 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 ADAMTS14Q8WXS8 1223 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 SLC47A1Q96FL8 570 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 CENPNQ96H22 339 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-209ENST00000397036 BTBD9Q96Q07 612 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 PKP2Q99959 881 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 CRB3Q9BUF7 120 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 SEMA4CQ9C0C4 833 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF350Q9GZX5 532 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 AGPAT4Q9NRZ5 378 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
MCF2L-209ENST00000397036 PADI2Q9Y2J8 665 aa12.64□□□□□ -0.39
MCF2L-209ENST00000397036 GPR55Q9Y2T6 319 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-209ENST00000397036 SAGE2PA6NJ88 616 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 ABCB7O75027 752 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 STX11O75558 287 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 PRSS23O95084 383 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 H6PDO95479 791 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 CT45A8P0DMV1 189 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 CT45A9P0DMV2 189 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 DRD5P21918 477 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 CD82P27701 267 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 AQP1P29972 269 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 GABRA3P34903 492 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 KCNJ5P48544 419 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 POU6F2P78424 691 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 KCNJ10P78508 379 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF155Q12901 538 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 TARDBPQ13148 414 aaKnown RBP eCLIP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 ATP6AP1Q15904 470 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 CYP27C1Q4G0S4 372 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 IQCCQ4KMZ1 466 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 GPAT3Q53EU6 434 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 CT45A2Q5DJT8 189 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 SLC44A2Q8IWA5 706 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 PRSS58Q8IYP2 241 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 GALNT15Q8N3T1 639 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 ESX1Q8N693 406 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 COX18Q8N8Q8 333 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 NFAM1Q8NET5 270 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 OR8K3Q8NH51 312 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 CDS1Q92903 461 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 C7orf34Q96L11 122 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 SEPHS2Q99611 448 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 SOX17Q9H6I2 414 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-209ENST00000397036 RUBCNLQ9H714 662 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 IFT52Q9Y366 437 aa12.63□□□□□ -0.39
MCF2L-209ENST00000397036 NUP210LQ5VU65 1888 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms