RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TSPAN2O60636 221 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 EPB42P16452 691 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 TCEA1P23193 301 aaKnown RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 GRK2P25098 689 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 TPD52P55327 224 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 POU4F1Q01851 419 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 ILF2Q12905 390 aaKnown RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 EXOSC7Q15024 291 aaKnown RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 PON3Q15166 354 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 HP1BP3Q5SSJ5 553 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 OR5M10Q6IEU7 315 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 FADS6Q8N9I5 356 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 ADCY4Q8NFM4 1077 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 SMAP2Q8WU79 429 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 ROBO4Q8WZ75 1007 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 LRRC39Q96DD0 335 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 C11orf24Q96F05 449 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 KCNK17Q96T54 332 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 BARX1Q9HBU1 254 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 MOCS1Q9NZB8 636 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 MAT2BQ9NZL9 334 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 BCAP29Q9UHQ4 241 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 GPR52Q9Y2T5 361 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 ZNF337Q9Y3M9 751 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 RNF115Q9Y4L5 304 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 PCDHGA11Q9Y5H2 935 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 LINC01387J3KSC0 135 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 NDUFS7O75251 213 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 CBX7O95931 251 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 ALDOAP04075 364 aaKnown RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 S100BP04271 92 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 FNTAP49354 379 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 EMDP50402 254 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 NEK2P51955 445 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 PHEXP78562 749 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 VLDLRP98155 873 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 RUNX1T1Q06455 604 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 TMEM249Q2WGJ8 235 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 NCMAPQ5T1S8 102 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 LIPJQ5W064 366 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 NUDT13Q86X67 352 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 METTL25Q8N6Q8 603 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 TRIM58Q8NG06 486 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 OR10H5Q8NGA6 315 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 TMBIM1Q969X1 311 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 MS4A14Q96JA4 679 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 UBXN10Q96LJ8 280 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 RHNO1Q9BSD3 238 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 GRIP2Q9C0E4 1043 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 ACTR6Q9GZN1 396 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 LRTM1Q9HBL6 345 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 NSMCE4AQ9NXX6 385 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 NUDT4Q9NZJ9 180 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 OPTCQ9UBM4 332 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 PRODH2Q9UF12 536 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 GDF2Q9UK05 429 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 CES1P1Q9UKY3 287 aa7.56□□□□□ -1.2
SCFD1-202ENST00000396629 GPR55Q9Y2T6 319 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 MTO1Q9Y2Z2 717 aaKnown RBP7.56□□□□□ -1.2
SCFD1-202ENST00000396629 IGHV4-30-2A0A087WSY4 118 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 H0YIV9 168 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 FOXE1O00358 373 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-202ENST00000396629 REM1O75628 298 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 AQP8O94778 261 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 CD8AP01732 235 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 GBAP04062 536 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 ATP1B1P05026 303 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 FCGR2AP12318 317 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 PSMB1P20618 241 aaKnown RBP7.55□□□□□ -1.2
SCFD1-202ENST00000396629 IVDP26440 423 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 SLC12A2P55011 1212 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 CLDN20P56880 219 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 LOXL1Q08397 574 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-202ENST00000396629 ZNF844Q08AG5 666 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 EFR3AQ14156 821 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 PGGHGQ32M88 737 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 ZNF672Q499Z4 452 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-202ENST00000396629 BEND4Q6ZU67 534 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 PDIK1LQ8N165 341 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 OR4K17Q8NGC6 315 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 OR52R1Q8NGF1 315 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 NEUROG1Q92886 237 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 TSPAN17Q96FV3 270 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 TNFRSF13CQ96RJ3 184 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 TRAF4Q9BUZ4 470 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-202ENST00000396629 BRINP2Q9C0B6 783 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 STMN4Q9H169 189 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-202ENST00000396629 CAB39LQ9H9S4 337 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 PLLPQ9Y342 182 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 EMC9Q9Y3B6 208 aa7.55□□□□□ -1.2
SCFD1-202ENST00000396629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.55□□□□□ -1.29e-7■■■■■ 35.8
SCFD1-202ENST00000396629 A0A1W2PP18 115 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 OR2M5A3KFT3 312 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 C17orf51A8MQB3 221 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 PHGDHO43175 533 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SEC14L5O43304 696 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SS18L1O75177 396 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SEMA3DO95025 777 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 CD3EP07766 207 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms