RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PLGLAQ15195 96 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 DCAF4L2Q8NA75 395 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 SPTSSAQ969W0 71 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 DDIT4LQ96D03 193 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF681Q96N22 645 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 HRASLS2Q9NWW9 162 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 YIPF1Q9Y548 306 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 FAM221BA6H8Z2 402 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 STMND1H3BQB6 276 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 RHOP08100 348 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 HOXB2P14652 356 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 CD1DP15813 335 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 FXYD4P59646 89 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 RPS15AP62244 130 aaKnown RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 TDGQ13569 410 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF169Q14929 603 aaPredicted RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 PLBD1Q6P4A8 553 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 CNIH2Q6PI25 160 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 CMTM8Q8IZV2 173 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 TEX19Q8NA77 164 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 NDNFQ8TB73 568 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 NT5C3BQ969T7 300 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 SHDQ96IW2 340 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 PSAT1Q9Y617 370 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 CFHP08603 1231 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 FBLP22087 321 aaKnown RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 RPS21P63220 83 aaKnown RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 RCAN2Q14206 197 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 FAM83FQ8NEG4 500 aaPredicted RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 SETD7Q8WTS6 366 aaKnown RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 B3GNT2Q9NY97 397 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 B3GNT3Q9Y2A9 372 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF487B1APH4 448 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 PIGRP01833 764 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 RAB6AP20340 208 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 MELKQ14680 651 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 ARL6IP1Q15041 203 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 AGAP7PQ5VUJ5 663 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 AGAP6Q5VW22 663 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 RAET1LQ5VY80 246 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 IL17RCQ8NAC3 791 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 TMEM185AQ8NFB2 350 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 BBS1Q8NFJ9 593 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 SLC7A13Q8TCU3 470 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 C16orf78Q8WTQ4 265 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 AGAP4Q96P64 663 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 PPA2Q9H2U2 334 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 ALDOBP05062 364 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 IFNL1Q8IU54 200 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 SFXN5Q8TD22 340 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 GCDHQ92947 438 aaPredicted RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 DUOX1Q9NRD9 1551 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 SDHDO14521 159 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 GRIN2CQ14957 1233 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 SF3A2Q15428 464 aaKnown RBP13.31□□□□□ -0.28
COL4A3-202ENST00000396578 LCN8Q6JVE9 175 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 FAM217AQ8IXS0 508 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 PTCHD1Q96NR3 888 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 CRTAPO75718 401 aaPredicted RBP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 TBPL1P62380 186 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 ALG8Q9BVK2 526 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GJE1A6NN92 205 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF736B4DX44 427 aaPredicted RBP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 ANHXE9PGG2 379 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 EPHA1P21709 976 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 DLX2Q07687 328 aaPredicted RBP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF783Q6ZMS7 281 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 BOLLQ8N9W6 283 aaKnown RBP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 OR1S1Q8NH92 325 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 SORCS1Q8WY21 1168 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 NSUN5Q96P11 429 aaKnown RBP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 FEVQ99581 238 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 TMEM175Q9BSA9 504 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 SYNPO2LQ9H987 977 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GCM1Q9NP62 436 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GMEB2Q9UKD1 530 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 SLC6A5Q9Y345 797 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 OPRL1P41146 370 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 SMYD5Q6GMV2 418 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 OR1J4Q8NGS1 313 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 OR5W2Q8NH69 310 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 SIGLEC10Q96LC7 697 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 NFS1Q9Y697 457 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF860A6NHJ4 632 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 SYT7O43581 403 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 AKAIN1P0CW23 69 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 C2orf76Q3KRA6 126 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 KCNIP4Q6PIL6 250 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GPR137CQ8N3F9 429 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 PAQR8Q8TEZ7 354 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 HEBP1Q9NRV9 189 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GFOD1Q9NXC2 390 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 MRPS14O60783 128 aaKnown RBP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GAAP10253 952 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 WNT4P56705 351 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms