RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 AMER2Q8N7J2 671 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 TCEANCQ8N8B7 351 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 GNPDA2Q8TDQ7 276 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 GPA33Q99795 319 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 MROQ9BYG7 248 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 C6orf106Q9H6K1 298 aaPredicted RBP15.73■□□□□ 0.11
NUP50-202ENST00000396096 ANKRA2Q9H9E1 313 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 POT1Q9NUX5 634 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 SLC13A4Q9UKG4 626 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 A0A087WUU8 490 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 KPNA4O00629 521 aaPredicted RBP15.72■□□□□ 0.11
NUP50-202ENST00000396096 TPST2O60704 377 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 SCG5P05408 212 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 ENDOUP21128 410 aaKnown RBP15.72■□□□□ 0.11
NUP50-202ENST00000396096 RABIFP47224 123 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 TAS2R41P59536 307 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 UBE2IP63279 158 aaKnown RBP15.72■□□□□ 0.11
NUP50-202ENST00000396096 MED22Q15528 200 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 DEFB134Q4QY38 66 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 EXOSC6Q5RKV6 272 aaKnown RBP15.72■□□□□ 0.11
NUP50-202ENST00000396096 C6orf132Q5T0Z8 1188 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 TUBA3EQ6PEY2 450 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 FRRS1Q6ZNA5 592 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 ZNF554Q86TJ5 538 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 TRIM48Q8IWZ4 208 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 MINDY2Q8NBR6 621 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 SMRP1Q8NCR6 262 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 ZCCHC10Q8TBK6 192 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 ZG16BQ96DA0 208 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 ZFYVE21Q9BQ24 234 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 TSSK6Q9BXA6 273 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 RHBDL2Q9NX52 303 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 KLHL28Q9NXS3 571 aa15.72■□□□□ 0.11
NUP50-202ENST00000396096 USP36Q9P275 1121 aaKnown RBP15.72■□□□□ 0.11
NUP50-202ENST00000396096 GPR55Q9Y2T6 319 aaPredicted RBP15.72■□□□□ 0.11
NUP50-202ENST00000396096 ARHGEF17Q96PE2 2063 aaPredicted RBP15.72■□□□□ 0.11
NUP50-202ENST00000396096 C2orf74A8MZ97 194 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 DSCR3O14972 297 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 PRKYO43930 277 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 SEMA4FO95754 770 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 TNFP01375 233 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 IFI6P09912 130 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 HSMCR30P0CW71 290 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 ALOX12P18054 663 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 RANBP1P43487 201 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 SMSP52788 366 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 PDX1P52945 283 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 TFF2Q03403 129 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 ST3GAL3Q11203 375 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 OXA1LQ15070 435 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 TSTQ16762 297 aaKnown RBP15.71■□□□□ 0.11
NUP50-202ENST00000396096 ARHGAP11BQ3KRB8 267 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 MANEAQ5SRI9 462 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 RNF44Q7L0R7 432 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 KIF18BQ86Y91 864 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 IQCF1Q8N6M8 205 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 SLC16A11Q8NCK7 471 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 OR52P1PQ8NH57 321 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 BAHD1Q8TBE0 780 aaPredicted RBP15.71■□□□□ 0.11
NUP50-202ENST00000396096 OPALINQ96PE5 141 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 MTHFD2LQ9H903 347 aaPredicted RBP15.71■□□□□ 0.11
NUP50-202ENST00000396096 TVP23BQ9NYZ1 205 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 CD207Q9UJ71 328 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 LOC105369274A0A096LPK9 316 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 LOC102723532A0A0G2JNH3 316 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 ARHGAP33O14559 1287 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 ZSCAN9O15535 394 aaPredicted RBP15.71■□□□□ 0.11
NUP50-202ENST00000396096 IGLV3-19P01714 112 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 CPMP14384 443 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 CD40LGP29965 261 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 SOX18P35713 384 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 LSM11P83369 360 aaKnown RBP eCLIP15.71■□□□□ 0.11
NUP50-202ENST00000396096 TSPAN31Q12999 210 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 ATP1A4Q13733 1029 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 DOC2BQ14184 412 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 SSX1Q16384 188 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 ZNF628Q5EBL2 1059 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 TMEM31Q5JXX7 168 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 FHL5Q5TD97 284 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 ACSM5Q6NUN0 579 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 NIPAL1Q6NVV3 410 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 OR4N4Q8N0Y3 316 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 OR10G6Q8NH81 332 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 CENPOQ9BU64 300 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 MND1Q9BWT6 205 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 SEMA4GQ9NTN9 838 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 MRPS18AQ9NVS2 196 aaKnown RBP15.71■□□□□ 0.11
NUP50-202ENST00000396096 CPNE7Q9UBL6 633 aa15.71■□□□□ 0.11
NUP50-202ENST00000396096 C19orf53Q9UNZ5 99 aaPredicted RBP15.71■□□□□ 0.11
NUP50-202ENST00000396096 KIR2DS5A0A0G2JLQ3 304 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 A0A0G2JNG1 304 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 LOC100506127A0A0U1RQW1 187 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 PRAMEF26H0Y7S4 382 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 H0YGG7 62 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 KIR2DS3K7RE56 304 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 TAF4O00268 1085 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 FCMRO60667 390 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 PORP16435 677 aaPredicted RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 IFNA8P32881 189 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 CCR5P51681 352 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms