RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DDAH2O95865 285 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 SELENOWP63302 87 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 ARHGAP11BQ3KRB8 267 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 PRAMEF8Q5VWM4 474 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 PRAMEF7Q5VXH5 474 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 FKBP9P1Q75LS8 142 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 OLIG3Q7RTU3 272 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 TIPARPQ7Z3E1 657 aaKnown RBP18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 KRT73Q86Y46 540 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 ZNF321PQ8N8H1 164 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 MORN4Q8NDC4 146 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 PAPD5Q8NDF8 572 aaKnown RBP18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 PIK3R3Q92569 461 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 HOXB13Q92826 284 aaPredicted RBP18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 VSTM2LQ96N03 204 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 BCL2L10Q9HD36 194 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 C6orf203Q9P0P8 240 aaPredicted RBP18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 STOML1Q9UBI4 398 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 COPS7AQ9UBW8 275 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 C19orf25Q9UFG5 118 aaPredicted RBP18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 DTX4Q9Y2E6 619 aa18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 PTRH2Q9Y3E5 179 aaKnown RBP18.98■□□□□ 0.63
VCPKMT-202ENST00000395860 SDK2Q58EX2 2172 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 IGHV3-20A0A0C4DH32 117 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 A0A0G2JPF8 293 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 HNRNPCL2B2RXH8 293 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 HNRNPCL3B7ZW38 293 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 SLC30A4O14863 429 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 NKX2-2O95096 273 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 CD63P08962 238 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 HNRNPCL4P0DMR1 293 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 SLC37A1P57057 533 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 PSG6Q00889 435 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 LRTOMTQ8WZ04 291 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 LZICQ8WZA0 190 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 HSH2DQ96JZ2 352 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 DOHHQ9BU89 302 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 CHID1Q9BWS9 393 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 BTBD2Q9BX70 525 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 SPRY4Q9C004 299 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 YY1AP1Q9H869 796 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 CFL2Q9Y281 166 aa18.97■□□□□ 0.63
VCPKMT-202ENST00000395860 GFRA3O60609 400 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 SERPINB7O75635 380 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 AK1P00568 194 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 IGKV3-11P04433 115 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 POU6F2P78424 691 aaPredicted RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 DCST2Q5T1A1 773 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 TMEM205Q6UW68 189 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 LRRC74BQ6ZQY2 392 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 CPEB2Q7Z5Q1 589 aaKnown RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 VTCN1Q7Z7D3 282 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 OR1N1Q8NGS0 311 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 SLC46A1Q96NT5 459 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 COL21A1Q96P44 957 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 PKP2Q99959 881 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 NUDT9Q9BW91 350 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 ITPAQ9BY32 194 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 ZFHX2Q9C0A1 2572 aaPredicted RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 TTC36A6NLP5 189 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 KLF7O75840 302 aaPredicted RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 MT-ND1P03886 318 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 FCGR1AP12314 374 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 ETS2P15036 469 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 HOXB6P17509 224 aaKnown RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 CCNJQ5T5M9 372 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 MARCH9Q86YJ5 346 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 ARMC8Q8IUR7 673 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 LILRA2Q8N149 483 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 SMYD1Q8NB12 490 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 CHDHQ8NE62 594 aaPredicted RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 SDF2Q99470 211 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 SPATA5L1Q9BVQ7 753 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 SLC38A1Q9H2H9 487 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 SEC14L3Q9UDX4 400 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 CDV3Q9UKY7 258 aaKnown RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 PADI2Q9Y2J8 665 aa18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 GPC6Q9Y625 555 aaPredicted RBP18.96■□□□□ 0.63
VCPKMT-202ENST00000395860 ZNF292O60281 2723 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 GXYLT2A0PJZ3 443 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 SAGE2PA6NJ88 616 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 MFN2O95140 757 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 TCN2P20062 427 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 FASP25445 335 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 FOLR3P41439 243 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 CHRNEQ04844 493 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 FAM69BQ5VUD6 431 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 PAPD4Q6PIY7 484 aaKnown RBP18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 ERMP1Q7Z2K6 904 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 GALNT15Q8N3T1 639 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 ESX1Q8N693 406 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 OR2Y1Q8NGV0 311 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 CT55Q8WUE5 264 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 RASSF5Q8WWW0 418 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 ADAMTS14Q8WXS8 1223 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 LPAR4Q99677 370 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 MESP1Q9BRJ9 268 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 B3GNT4Q9C0J1 378 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 Q9N2J8 555 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 RIMS3Q9UJD0 308 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms