RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 OLAHQ9NV23 265 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 SNX8Q9Y5X2 465 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 CHCHD2Q9Y6H1 151 aaPredicted RBP15.23■□□□□ 0.03
CXCL1-201ENST00000395761 SHANK1Q9Y566 2161 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 KLRC4-KLRK1H3BQV0 150 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 CFLARO15519 480 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 EMC8O43402 210 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 PPM1BO75688 479 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 P04436 131 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 NCF2P19878 526 aaPredicted RBP15.22■□□□□ 0.03
CXCL1-201ENST00000395761 CNR1P21554 472 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 KIR3DL1P43629 444 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 DNASE1L1P49184 302 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 DGKQP52824 942 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 CLNS1AP54105 237 aaKnown RBP15.22■□□□□ 0.03
CXCL1-201ENST00000395761 HBA1P69905 142 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 PLCXD2Q0VAA5 305 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 FAM174BQ3ZCQ3 159 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 PRAMEF20Q5VT98 475 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 SZRD1Q7Z422 152 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 ANKRD46Q86W74 232 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 DND1Q8IYX4 353 aaKnown RBP15.22■□□□□ 0.03
CXCL1-201ENST00000395761 SLC34A3Q8N130 599 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 DNAJB8Q8NHS0 232 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 PSMA8Q8TAA3 256 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 TMBIM1Q969X1 311 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 OMA1Q96E52 524 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 LMF2Q9BU23 707 aaKnown RBP15.22■□□□□ 0.03
CXCL1-201ENST00000395761 MYLK2Q9H1R3 596 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 C3orf14Q9HBI5 128 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 PROK2Q9HC23 129 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 SAR1AQ9NR31 198 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 ZIM2Q9NZV7 527 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 CNOT11Q9UKZ1 510 aaKnown RBP15.22■□□□□ 0.03
CXCL1-201ENST00000395761 NBASA2RRP1 2371 aa15.22■□□□□ 0.03
CXCL1-201ENST00000395761 PRSS51A0A1B0GVH4 220 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 CAPN14A8MX76 684 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 CBX6O95503 412 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 CRYABP02511 175 aaKnown RBP15.21■□□□□ 0.03
CXCL1-201ENST00000395761 NAGAP17050 411 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 S100A3P33764 101 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 ZFP36L2P47974 494 aaKnown RBP15.21■□□□□ 0.03
CXCL1-201ENST00000395761 UQCRFS1P47985 274 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 GAB1Q13480 694 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 SQLEQ14534 574 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 BICRALQ6AI39 1079 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 PAOXQ6QHF9 649 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 CLEC4FQ8N1N0 589 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 MIER2Q8N344 545 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 FBXW8Q8N3Y1 598 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 FAM98AQ8NCA5 519 aaKnown RBP15.21■□□□□ 0.03
CXCL1-201ENST00000395761 GALNT11Q8NCW6 608 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 OR2M7Q8NG81 312 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 SPPL2AQ8TCT8 520 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 NR4A3Q92570 626 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 HGDQ93099 445 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 SLX1AQ9BQ83 275 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 YIPF4Q9BSR8 244 aa15.21■□□□□ 0.03
CXCL1-201ENST00000395761 TSPAN10Q9H1Z9 355 aaPredicted RBP15.21■□□□□ 0.03
CXCL1-201ENST00000395761 RYDENQ9NUL5 291 aaKnown RBP15.21■□□□□ 0.03
CXCL1-201ENST00000395761 GXYLT2A0PJZ3 443 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 RNASET2O00584 256 aaKnown RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 TP53I11O14683 189 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 SLC22A2O15244 555 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 TSPAN2O60636 221 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 UGT2B11O75310 529 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 REM1O75628 298 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 SLC22A3O75751 556 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 DCTN3O75935 186 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 CPSF4O95639 269 aaKnown RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 GNLYP22749 145 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 GABRA3P34903 492 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 MAP3K8P41279 467 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 CCT3P49368 545 aaKnown RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 TDGF1P3P51864 188 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 STX1BP61266 288 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 ALDH6A1Q02252 535 aaKnown RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 MRPL49Q13405 166 aaKnown RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 SPDYE7PQ495Y7 208 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 ANXA8L1Q5VT79 327 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 MTDHQ86UE4 582 aaKnown RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 ATCAYQ86WG3 371 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 SIAH3Q8IW03 269 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 ZFP62Q8NB50 900 aaPredicted RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 GLB1L3Q8NCI6 653 aaPredicted RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 SLC16A11Q8NCK7 471 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 OR4A15Q8NGL6 344 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 OR9I1Q8NGQ6 314 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 OR5AK3PQ8NH89 298 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 FBXO30Q8TB52 745 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 PIK3R3Q92569 461 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 DIO2Q92813 273 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 HOXB13Q92826 284 aaPredicted RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 OTUB1Q96FW1 271 aaPredicted RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 MS4A4EQ96PG1 132 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 NODALQ96S42 347 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 ADOQ96SZ5 270 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 ZBTB18Q99592 522 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 FAM173AQ9BQD7 235 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 NMUR2Q9GZQ4 415 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms