RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 KCND3Q9UK17 655 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 NADKO95544 446 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 NT5EP21589 574 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 CLK1P49759 484 aaKnown RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 ALDH6A1Q02252 535 aaKnown RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 EIF2B5Q13144 721 aaKnown RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 IPCEF1Q8WWN9 437 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 KLHL6Q8WZ60 621 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 FAM60AQ9NP50 221 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 SACM1LQ9NTJ5 587 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 PCOLCE2Q9UKZ9 415 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 PRAMEF26H0Y7S4 382 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 TLR4O00206 839 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 TPPPO94811 219 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 CKMT1AP12532 417 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 HHEXQ03014 270 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 DBPQ10586 325 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-204ENST00000395756 SF3B4Q15427 424 aaKnown RBP eCLIP16.77■□□□□ 0.287e-10■■■■■ 30.6
SREBF1-204ENST00000395756 CLEC12AQ5QGZ9 265 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 SYT6Q5T7P8 510 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-204ENST00000395756 BTLAQ7Z6A9 289 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 ZER1Q7Z7L7 766 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 MYDGFQ969H8 173 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 SLC38A1Q9H2H9 487 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 POLMQ9NP87 494 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-204ENST00000395756 CNIH4Q9P003 139 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 KCMF1Q9P0J7 381 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 DAPP1Q9UN19 280 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 PCDHGB1Q9Y5G3 927 aa16.77■□□□□ 0.28
SREBF1-204ENST00000395756 AGRPO00253 132 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 TLX2O43763 284 aaPredicted RBP16.77■□□□□ 0.27
SREBF1-204ENST00000395756 CLPXO76031 633 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 ALOX12P18054 663 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 MMP11P24347 488 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 C21orf59P57076 290 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 ATAD3BQ5T9A4 648 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 RASSF5Q8WWW0 418 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 PIK3R3Q92569 461 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 ZBTB20Q9HC78 741 aaPredicted RBP16.77■□□□□ 0.27
SREBF1-204ENST00000395756 FTSJ1Q9UET6 329 aa16.77■□□□□ 0.27
SREBF1-204ENST00000395756 CENPVL1A0A0U1RR11 272 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 FAM47E-STBD1D6RA91 191 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 TNFRSF10CO14798 259 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 ZIC2O95409 532 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 OSMP13725 252 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 TLX1P31314 330 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 GSTM5P46439 218 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 MAZP56270 477 aaKnown RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 TNFRSF17Q02223 184 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 EXOSC7Q15024 291 aaKnown RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 CASP12Q6UXS9 341 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 ZNF675Q8TD23 568 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 ASB12Q8WXK4 309 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 LGALS12Q96DT0 336 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 C10orf90Q96M02 699 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 OR5M11Q96RB7 305 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 SARGQ9BW04 601 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 RERGLQ9H628 205 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 REV1Q9UBZ9 1251 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 LGI1O95970 557 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 ALPPP05187 535 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 CDK1P06493 297 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 HOXC4P09017 264 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 OPRL1P41146 370 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 RABIFP47224 123 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 RPS3AP61247 264 aaKnown RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 YPEL5P62699 121 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 FZD2Q14332 565 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 CENPSQ8N2Z9 138 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 METTL27Q8N6F8 245 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 EGLN3Q9H6Z9 239 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 TBC1D23Q9NUY8 699 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 CLN6Q9NWW5 311 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 LYARQ9NX58 379 aaKnown RBP16.76■□□□□ 0.27
SREBF1-204ENST00000395756 KLHL3Q9UH77 587 aa16.76■□□□□ 0.27
SREBF1-204ENST00000395756 ZAR1LA6NP61 321 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 C2orf74A8MZ97 194 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 M0R082 166 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 FGF17O60258 216 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 GABRB1P18505 474 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 TRHRP34981 398 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-204ENST00000395756 ITGADQ13349 1161 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 DCDC5Q6ZRR9 648 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 ADCK1Q86TW2 530 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 CAMKVQ8NCB2 501 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 BBS10Q8TAM1 723 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 YIPF6Q96EC8 236 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 ITPAQ9BY32 194 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 GSDMCQ9BYG8 508 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 LMAN1LQ9HAT1 526 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 FBXO34Q9NWN3 711 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 ZSCAN32Q9NX65 697 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 GPR52Q9Y2T5 361 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 FAAHO00519 579 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 CNOT3O75175 753 aaKnown RBP16.75■□□□□ 0.27
SREBF1-204ENST00000395756 CH25HO95992 272 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 ST6GAL1P15907 406 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 GADD45AP24522 165 aa16.75■□□□□ 0.27
SREBF1-204ENST00000395756 ANXA11P50995 505 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms