RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PEA15Q15121 130 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 ATXN7L2Q5T6C5 722 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 DCAF15Q66K64 600 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 ZNF621Q6ZSS3 439 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 CBLL1Q75N03 491 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 IZUMO1Q8IYV9 350 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 ZNF511Q8NB15 262 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 OR52B4Q8NGK2 314 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 ACOT11Q8WXI4 607 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 GINS4Q9BRT9 223 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 XKR8Q9H6D3 395 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 C11orf49Q9H6J7 331 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 BARX1Q9HBU1 254 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 TDP1Q9NUW8 608 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 DLGAP4Q9Y2H0 992 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 STRCP1A6NGW2 1772 aa11.84□□□□□ -0.51
SLC28A1-203ENST00000394573 C9orf170A2RU37 121 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 SLC7A4O43246 635 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 GALR3O60755 368 aaPredicted RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PEX11BO96011 259 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PIRTP0C851 137 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 NME1P15531 152 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 ITGA3P26006 1051 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 ABCD3P28288 659 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 CALCRP30988 508 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 S100A3P33764 101 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PITPNBP48739 271 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 OR52W1Q6IF63 320 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 TMEM71Q6P5X7 295 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 QSOX2Q6ZRP7 698 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 FAM122BQ7Z309 247 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 MEIOBQ8N635 442 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 SCLYQ96I15 445 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 AMDHD1Q96NU7 426 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 TGM7Q96PF1 710 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PBX4Q9BYU1 374 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 SLC25A19Q9HC21 320 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 NEU3Q9UQ49 428 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PLEKHA6Q9Y2H5 1048 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 NME7Q9Y5B8 376 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 ANHXE9PGG2 379 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 H3BN98 237 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 SLC34A2O95436 690 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 CPSF4O95639 269 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 GASTP01350 101 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 HCKP08631 526 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 ANXA7P20073 488 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 CNR1P21554 472 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 SLC1A3P43003 542 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 BOP1Q14137 746 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PGM5Q15124 567 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 FAAP20Q6NZ36 180 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 CEACAM20Q6UY09 585 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PDZD4Q76G19 769 aaPredicted RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PTOV1Q86YD1 416 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 MISPQ8IVT2 679 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 RNF149Q8NC42 400 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 RELTQ969Z4 430 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 CPNE4Q96A23 557 aaPredicted RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 PCDHB10Q9UN67 800 aa11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 FNDC3AQ9Y2H6 1198 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-203ENST00000394573 COLCA2A8K830 154 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 ZNF705EA8MWA4 302 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 CLIC1O00299 241 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 ZNF197O14709 1029 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 RB1P06400 928 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 ANXA2P07355 339 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 ANXA8P13928 327 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 NOS3P29474 1203 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 NDUFV1P49821 464 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 RBP2P50120 134 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 MAXP61244 160 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 SNTB2Q13425 540 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 KRT33BQ14525 404 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 ZRANB3Q5FWF4 1079 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 ZNF852Q6ZMS4 543 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 OR5M1Q8NGP8 315 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 THAP4Q8WY91 577 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 PINK1Q9BXM7 581 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 CLMPQ9H6B4 373 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 ATP13A1Q9HD20 1204 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 FEM1BQ9UK73 627 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 SF3B6Q9Y3B4 125 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 SLX4Q8IY92 1834 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 PHYHO14832 338 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 SEPT4O43236 478 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 MSCO60682 206 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 LILRB5O75023 590 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 F2P00734 622 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 TACR1P25103 407 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 CRISP1P54107 249 aa11.82□□□□□ -0.52
SLC28A1-203ENST00000394573 C21orf58P58505 322 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms