RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ZC3H14Q6PJT7 736 aaKnown RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 FRRS1Q6ZNA5 592 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 ANKRD13BQ86YJ7 626 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 OR2L13Q8N349 312 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 B3GNT7Q8NFL0 401 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 OR52P1PQ8NH57 321 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 YIPF6Q96EC8 236 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 TRNT1Q96Q11 434 aaKnown RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 MAP3K3Q99759 626 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 PINK1Q9BXM7 581 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 ROGDIQ9GZN7 287 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 GPN2Q9H9Y4 310 aaPredicted RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 SEMA4GQ9NTN9 838 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 SOX1O00570 391 aaPredicted RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 CDC123O75794 336 aaPredicted RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 ADAP00813 363 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 EMP3P54852 163 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 CDC42P60953 191 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 ST3GAL4Q11206 333 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 DOC2BQ14184 412 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 GPR68Q15743 365 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 SMAD2Q15796 467 aaKnown RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 ZNF628Q5EBL2 1059 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 ATAD3BQ5T9A4 648 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 MORN4Q8NDC4 146 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 NDNFQ8TB73 568 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 IPCEF1Q8WWN9 437 aaPredicted RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 SPATA5L1Q9BVQ7 753 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 BTBD2Q9BX70 525 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 POMT2Q9UKY4 750 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 MGAT4BQ9UQ53 548 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 KLK4Q9Y5K2 254 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 A0A0A6YYC8 382 aaPredicted RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 A0A1W2PRQ8 180 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 ARRDC5A6NEK1 342 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 I3L1I5 382 aaPredicted RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 ENTPD6O75354 484 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 UBXN7O94888 489 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 BCL10O95999 233 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 CDK1P06493 297 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 CD38P28907 300 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 LIPAP38571 399 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 BLKP51451 505 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 UGT2B15P54855 530 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 MAT1AQ00266 395 aaKnown RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 MAPK14Q16539 360 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 DEFB133Q30KQ1 61 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 INAVAQ3KP66 663 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 CDC73Q6P1J9 531 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 PRICKLE2Q7Z3G6 844 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 DEPDC4Q8N2C3 294 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 MS4A4EQ96PG1 132 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 PLCXD1Q9NUJ7 323 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 DMDP11532 3685 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 A0A087WUU8 490 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 A0A1W2PR77 199 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 METTL12A8MUP2 240 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 M0R082 166 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 CASC3O15234 703 aaKnown RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 TAS2R41P59536 307 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 NCS1P62166 190 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 MAP4K2Q12851 820 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 ILKQ13418 452 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 GNA13Q14344 377 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 ANKDD1AQ495B1 522 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 FHL5Q5TD97 284 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 TYW3Q6IPR3 259 aaKnown RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 HEPHL1Q6MZM0 1159 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 MCATQ8IVS2 390 aaKnown RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 METTL27Q8N6F8 245 aaPredicted RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 ANKRD9Q96BM1 317 aaPredicted RBP14.08□□□□□ -0.16
GPC3-202ENST00000394299 MSANTD3Q96H12 275 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 PRRC1Q96M27 445 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 SEMA6CQ9H3T2 930 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 LYRM4Q9HD34 91 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 CCNB1IP1Q9NPC3 277 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 FKBP14Q9NWM8 211 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 DNAJC27Q9NZQ0 273 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 NTMQ9P121 344 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 HCN3Q9P1Z3 774 aa14.08□□□□□ -0.16
GPC3-202ENST00000394299 FAM221BA6H8Z2 402 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 TLR4O00206 839 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 ASNA1O43681 348 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 ZNF217O75362 1048 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 GPR75O95800 540 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 PTHP01270 115 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 CSF2P04141 144 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 THY1P04216 161 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 ZNF10P21506 573 aaPredicted RBP14.07□□□□□ -0.16
GPC3-202ENST00000394299 NKAIN2Q5VXU1 208 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 FIGNL1Q6PIW4 674 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 DHRS4L2Q6PKH6 230 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 NKAIN4Q8IVV8 208 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 STX19Q8N4C7 294 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 SVOPQ8N4V2 548 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 C19orf47Q8N9M1 422 aaKnown RBP14.07□□□□□ -0.16
GPC3-202ENST00000394299 SDF2Q99470 211 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 EGLN3Q9H6Z9 239 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 TVP23BQ9NYZ1 205 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 KLHL3Q9UH77 587 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms