RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TRAPPC6AO75865 159 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 SERPINE1P05121 402 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 KRT20P35900 424 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 MPP2Q14168 576 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ATP6AP1LQ52LC2 224 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ZNF385BQ569K4 471 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ZNF585AQ6P3V2 769 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 LIX1Q8N485 282 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ELP4Q96EB1 424 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 GNRHR2Q96P88 292 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ADOQ96SZ5 270 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 OSBPL11Q9BXB4 747 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ZNF395Q9H8N7 513 aaPredicted RBP28.14■■■□□ 2.1
CMTM4-202ENST00000394106 SPRR3Q9UBC9 169 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ACTL7BQ9Y614 415 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 C2orf72A6NCS6 295 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 UPK1AO00322 258 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 PLOD2O00469 737 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 ZWINTO95229 277 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 ENDOUP21128 410 aaKnown RBP28.13■■■□□ 2.09
CMTM4-202ENST00000394106 MAPK1P28482 360 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 IL12BP29460 328 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 ASMTP46597 345 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 TOMM20Q15388 145 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 FNDC7Q5VTL7 733 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 ANGPTL8Q6UXH0 198 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 OR2L13Q8N349 312 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 RPRMLQ8N4K4 120 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 MARVELD2Q8N4S9 558 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 SARAFQ96BY9 339 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 TMEM41AQ96HV5 264 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 C1orf50Q9BV19 199 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 GALNT9Q9HCQ5 603 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 ACKR4Q9NPB9 350 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 C15orf41Q9Y2V0 281 aa28.13■■■□□ 2.09
CMTM4-202ENST00000394106 KLF2Q9Y5W3 355 aaPredicted RBP28.13■■■□□ 2.09
CMTM4-202ENST00000394106 PRAMEF25A6NGN4 478 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 OR6C70A6NIJ9 312 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 TMEM114B3SHH9 223 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 DHRS4L1P0CG22 281 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 AGAP20933 346 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 HTR1EP28566 365 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 GRNP28799 593 aaKnown RBP28.12■■■□□ 2.09
CMTM4-202ENST00000394106 GPC1P35052 558 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 ABCE1P61221 599 aaKnown RBP28.12■■■□□ 2.09
CMTM4-202ENST00000394106 CDSNQ15517 529 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 SP5Q6BEB4 398 aaPredicted RBP28.12■■■□□ 2.09
CMTM4-202ENST00000394106 TMEM211Q6ICI0 200 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 SLC30A6Q6NXT4 461 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 LARP4Q71RC2 724 aaKnown RBP eCLIP28.12■■■□□ 2.09
CMTM4-202ENST00000394106 OR4N2Q8NGD1 307 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 TMCO6Q96DC7 493 aa28.12■■■□□ 2.09
CMTM4-202ENST00000394106 ZNF764Q96H86 408 aaPredicted RBP28.12■■■□□ 2.09
CMTM4-202ENST00000394106 PAIP2Q9BPZ3 127 aaKnown RBP28.12■■■□□ 2.09
CMTM4-202ENST00000394106 TBX19O60806 448 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 ICOSLGO75144 302 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 PSPHP78330 225 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 PDE7AQ13946 482 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 WLSQ5T9L3 541 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 TMEM81Q6P7N7 255 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 WDR53Q7Z5U6 358 aaPredicted RBP28.11■■■□□ 2.09
CMTM4-202ENST00000394106 ANKRD42Q8N9B4 389 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 FNDC5Q8NAU1 212 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 OR1J4Q8NGS1 313 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 ZFP28Q8NHY6 868 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 NEIL3Q8TAT5 605 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 EFHD2Q96C19 240 aaPredicted RBP28.11■■■□□ 2.09
CMTM4-202ENST00000394106 SDCCAG3Q96C92 435 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 TUBGCP3Q96CW5 907 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 SLC35A4Q96G79 324 aa28.11■■■□□ 2.09
CMTM4-202ENST00000394106 FIGNL2A6NMB9 653 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 TSPAN2O60636 221 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 ABCB7O75027 752 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 BGNP21810 368 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 HPCAL1P37235 193 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 PTGDSP41222 190 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 PSG6Q00889 435 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 SNTA1Q13424 505 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 C6orf136Q5SQH8 315 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 TIGD3Q6B0B8 471 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 R3HCC1LQ7Z5L2 792 aaKnown RBP28.1■■■□□ 2.09
CMTM4-202ENST00000394106 ZNF781Q8N8C0 355 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 NTNG2Q96CW9 530 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 ZBED6CLQ96FA7 236 aaPredicted RBP28.1■■■□□ 2.09
CMTM4-202ENST00000394106 ALKBH4Q9NXW9 302 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 COQ3Q9NZJ6 369 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 FREM3P0C091 2139 aa28.1■■■□□ 2.09
CMTM4-202ENST00000394106 PSMG1O95456 288 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 CLDN14O95500 239 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 EFNA1P20827 205 aaPredicted RBP28.09■■■□□ 2.09
CMTM4-202ENST00000394106 ELAVL4P26378 380 aaKnown RBP28.09■■■□□ 2.09
CMTM4-202ENST00000394106 ACVR2AP27037 513 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 CDK9P50750 372 aaKnown RBP28.09■■■□□ 2.09
CMTM4-202ENST00000394106 MANFP55145 182 aaKnown RBP28.09■■■□□ 2.09
CMTM4-202ENST00000394106 EFR3AQ14156 821 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 ZNHIT3Q15649 155 aaPredicted RBP28.09■■■□□ 2.09
CMTM4-202ENST00000394106 PDCD2Q16342 344 aaPredicted RBP28.09■■■□□ 2.09
CMTM4-202ENST00000394106 MTERF3Q96E29 417 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 PPP1R36Q96LQ0 422 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 UBQLN3Q9H347 655 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms