RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 C8orf33Q9H7E9 229 aaPredicted RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 SCML1Q9UN30 329 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 RPL36Q9Y3U8 105 aaKnown RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 ASB4Q9Y574 426 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 SCN8AQ9UQD0 1980 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 A0A1W2PP55 124 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 K7ESM1 405 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 STK25O00506 426 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 OR5F1O95221 314 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 PRNPP04156 253 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 POU2F1P14859 743 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 EPORP19235 508 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 ITGALP20701 1170 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 DRD1P21728 446 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 MAP2K6P52564 334 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 HSF2Q03933 536 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 LRRC74AQ0VAA2 488 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 FGFBP1Q14512 234 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 RGNQ15493 299 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 CST6Q15828 149 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 CPSF6Q16630 551 aaKnown RBP eCLIP10.5□□□□□ -0.73
CUX1-204ENST00000393824 GPR33Q49SQ1 333 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 AGBL4Q5VU57 503 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 NOXRED1Q6NXP6 359 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 C11orf65Q8NCR3 313 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.5□□□□□ -0.736e-6■■■■■ 38.3
CUX1-204ENST00000393824 GTPBP3Q969Y2 492 aaKnown RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 APIPQ96GX9 242 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 IER2Q9BTL4 223 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 BOCQ9BWV1 1114 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 GSX2Q9BZM3 304 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 CLEC4MQ9H2X3 399 aaPredicted RBP10.5□□□□□ -0.73
CUX1-204ENST00000393824 KCTD5Q9NXV2 234 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 TAS2R7Q9NYW3 318 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 BTNL2Q9UIR0 455 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 ZNF175Q9Y473 711 aa10.5□□□□□ -0.73
CUX1-204ENST00000393824 A0A1W2PRG6 482 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 PRAMEF25A6NGN4 478 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 ISM1B1AKI9 464 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 TLR4O00206 839 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 SH3BP5O60239 455 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 CPSF4O95639 269 aaKnown RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 ZP3P21754 424 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 AQP1P29972 269 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 CCT3P49368 545 aaKnown RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 PTPN5P54829 565 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 RAB14P61106 215 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 IL18Q14116 193 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 CHRNA6Q15825 494 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 PLA1AQ53H76 456 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 LIPIQ6XZB0 460 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 ADGRF3Q8IZF5 1079 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 CBARPQ8N350 705 aaPredicted RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 ZNF655Q8N720 491 aaPredicted RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 ZBTB44Q8NCP5 570 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 OR4A15Q8NGL6 344 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 OR52P1PQ8NH57 321 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 PHF21AQ96BD5 680 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 WBP1Q96G27 269 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 SCMH1Q96GD3 660 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 LRIG1Q96JA1 1093 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 RBP7Q96R05 134 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 IL4I1Q96RQ9 567 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 SHARPINQ9H0F6 387 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 GHITMQ9H3K2 345 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 FANCFQ9NPI8 374 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 LYARQ9NX58 379 aaKnown RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 DCAF16Q9NXF7 216 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 COMMD3Q9UBI1 195 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 SF3B6Q9Y3B4 125 aaKnown RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 C1orf226A1L170 272 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 FAM170BA6NMN3 283 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 YKT6O15498 198 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 MMP20O60882 483 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 MTX2O75431 263 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 MPC2O95563 127 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 GASTP01350 101 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 OR56A5P0C7T3 313 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 ANXA3P12429 323 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 TNFRSF1BP20333 461 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 ACRV1P26436 265 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 FGF9P31371 208 aaPredicted RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 XCR1P46094 333 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 OR1E2P47887 323 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 HNMTP50135 292 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 S100A12P80511 92 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 NFATC2Q13469 925 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 ARHGEF7Q14155 803 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 ZNF284Q2VY69 593 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 LGALSLQ3ZCW2 172 aaPredicted RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 ATP13A5Q4VNC0 1218 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 USP30Q70CQ3 517 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 CLECL1Q8IZS7 167 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 AQP11Q8NBQ7 271 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 OR11H7Q8NGC8 314 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 LKAAEAR1Q8TD35 194 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 MAL2Q969L2 176 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 MRGPRX1Q96LB2 322 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 SLC6A18Q96N87 628 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms