RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 METTL4Q8N3J2 472 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 ADCY4Q8NFM4 1077 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 SPATA3Q8NHX4 192 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 TMBIM1Q969X1 311 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 CNRIP1Q96F85 164 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 COL21A1Q96P44 957 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 BTBD9Q96Q07 612 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 FRG2BQ96QU4 278 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 LRRC1Q9BTT6 524 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 MED18Q9BUE0 208 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 REPIN1Q9BWE0 567 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 OPN3Q9H1Y3 402 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 NOL11Q9H8H0 719 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 CPSF2Q9P2I0 782 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 DKKL1Q9UK85 242 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 MRPS18CQ9Y3D5 142 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 PRR14LQ5THK1 2151 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 C1orf226A1L170 272 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 SLC22A20A6NK97 555 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 ZIC3O60481 467 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 ERAL1O75616 437 aaKnown RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 CGAP01215 116 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 CSNK2A2P19784 350 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 TCEA1P23193 301 aaKnown RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 STX2P32856 288 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 KIR2DL2P43627 348 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 PPICP45877 212 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 PTH2RP49190 550 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 KRTAP1-1Q07627 177 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 ACAP2Q15057 778 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 FAM83EQ2M2I3 478 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 TECRLQ5HYJ1 363 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 OR2A2Q6IF42 318 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 PAGE2Q7Z2X7 111 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 ZNF550Q7Z398 422 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 BTLAQ7Z6A9 289 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 CCDC91Q7Z6B0 441 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 CNEP1R1Q8N9A8 125 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 LRRN4CLQ8ND94 238 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 FBF1Q8TES7 1133 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 KLHL29Q96CT2 875 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 PGM2Q96G03 612 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 ZNF681Q96N22 645 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 FAM111AQ96PZ2 611 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 ERP44Q9BS26 406 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 ZBTB26Q9HCK0 441 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 GPR55Q9Y2T6 319 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 TNPO3Q9Y5L0 923 aaKnown RBP13.88□□□□□ -0.19
CHMP3-202ENST00000393773 SAR1BQ9Y6B6 198 aa13.88□□□□□ -0.19
CHMP3-202ENST00000393773 TSPAN2O60636 221 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 ABCB7O75027 752 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 KLHL2O95198 593 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 GRK2P25098 689 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 CLDN15P56746 228 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 CORO7P57737 925 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 PPP2R2BQ00005 443 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 GUSBP1Q15486 140 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 BCL2A1Q16548 175 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 GGTA1PQ4G0N0 100 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 ZNF628Q5EBL2 1059 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 C10orf62Q5T681 223 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-202ENST00000393773 FAM219BQ5XKK7 198 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 OR5M10Q6IEU7 315 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 FAM180BQ6P0A1 224 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 NPSR1Q6W5P4 371 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 C22orf34Q6ZV56 151 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 P4HA3Q7Z4N8 544 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 PTGR2Q8N8N7 351 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-202ENST00000393773 ZNF675Q8TD23 568 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 TRPC4APQ8TEL6 797 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 FIG4Q92562 907 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 TMCO6Q96DC7 493 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 NSUN5Q96P11 429 aaKnown RBP13.87□□□□□ -0.19
CHMP3-202ENST00000393773 NTMT1Q9BV86 223 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 KCNF1Q9H3M0 494 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 FARSBQ9NSD9 589 aaKnown RBP13.87□□□□□ -0.19
CHMP3-202ENST00000393773 PRODH2Q9UF12 536 aa13.87□□□□□ -0.19
CHMP3-202ENST00000393773 FAM187AA6NFU0 413 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 RAD51CO43502 376 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 REM1O75628 298 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 CNOT4O95628 575 aaKnown RBP13.86□□□□□ -0.19
CHMP3-202ENST00000393773 ALDOAP04075 364 aaKnown RBP13.86□□□□□ -0.19
CHMP3-202ENST00000393773 CT45A8P0DMV1 189 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 CT45A9P0DMV2 189 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 POU2F1P14859 743 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 PAX1P15863 534 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 DPP4P27487 766 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 DEKP35659 375 aaKnown RBP13.86□□□□□ -0.19
CHMP3-202ENST00000393773 ARL1P40616 181 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-202ENST00000393773 CCNG1P51959 295 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 SIRPAP78324 504 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 CT45A2Q5DJT8 189 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 MROH9Q5TGP6 573 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 UBQLNLQ8IYU4 475 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 TM4SF18Q96CE8 201 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 DTNBP1Q96EV8 351 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms