RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PRAMEF20Q5VT98 475 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 TMEM198Q66K66 360 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 ZCCHC12Q6PEW1 402 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 CDRT4Q8N9R6 151 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 GLB1L3Q8NCI6 653 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 FAM120BQ96EK7 910 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 COL21A1Q96P44 957 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 MS4A4EQ96PG1 132 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 CCDC28BQ9BUN5 200 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 CXorf36Q9H7Y0 433 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 NEUROD4Q9HD90 331 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 Q9N2J8 555 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 SEC14L3Q9UDX4 400 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 CNOT11Q9UKZ1 510 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 HELZ2Q9BYK8 2649 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 ESPL1Q14674 2120 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 NINQ8N4C6 2090 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 A0A0G2JMM0 328 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 A0A1W2PPB8 328 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 A0A1W2PRS3 328 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 PINLYPA6NC86 204 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 OR6C70A6NIJ9 312 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 KIR3DP1A8MWS1 328 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 NPIPA5E9PKD4 350 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 TFECO14948 347 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 EDF1O60869 148 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 SLC22A3O75751 556 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 IL12BP29460 328 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 GABRA3P34903 492 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 RFC3P40938 356 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 PRIM2P49643 509 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 TDGF1P3P51864 188 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 PNLIPRP2P54317 469 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 KCNJ2P63252 427 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 HBA1P69905 142 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 MRPS22P82650 360 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 MRPL49Q13405 166 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 GAB1Q13480 694 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 EFR3AQ14156 821 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 FAM174BQ3ZCQ3 159 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 RNFT1Q5M7Z0 435 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 SPANXN4Q5MJ08 99 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 GFRALQ6UXV0 394 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 OR4N2Q8NGD1 307 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 OR56A1Q8NGH5 318 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 HGDQ93099 445 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 MOAP1Q96BY2 351 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 TMCO6Q96DC7 493 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 MARK4Q96L34 752 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 TEX37Q96LM6 180 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 ADOQ96SZ5 270 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 IL1RL2Q9HB29 575 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 MRTO4Q9UKD2 239 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 CBLCQ9ULV8 474 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 NPIPA1Q9UND3 350 aa17.45■□□□□ 0.38
PDLIM7-204ENST00000393546 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 ACOT7O00154 380 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 ASNA1O43681 348 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 TSPAN2O60636 221 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 UGT2B11O75310 529 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 SNX4O95219 450 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 IL12AP29459 219 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 CASP3P42574 277 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 UQCRFS1P47985 274 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 PPIAP62937 165 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 PHC1P78364 1004 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 DECR1Q16698 335 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 MFSD12Q6NUT3 480 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 BHLHB9Q6PI77 547 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 BNC2Q6ZN30 1099 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 WDR53Q7Z5U6 358 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 SLC22A16Q86VW1 577 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 SIAH3Q8IW03 269 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 CLECL1Q8IZS7 167 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 MIER2Q8N344 545 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 OR4A15Q8NGL6 344 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 SFXN5Q8TD22 340 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 GPR151Q8TDV0 419 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 SLC9A6Q92581 669 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 GIMAP5Q96F15 307 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 SLC35A4Q96G79 324 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 GPR137Q96N19 417 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 EBF4Q9BQW3 602 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 DOHHQ9BU89 302 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 ANGPTL4Q9BY76 406 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 TSPAN10Q9H1Z9 355 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 METTL7AQ9H8H3 244 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 PROK2Q9HC23 129 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 SDR39U1Q9NRG7 319 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 FAM120CQ9NX05 1096 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 TUBA8Q9NY65 449 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 ZIM2Q9NZV7 527 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 BOKQ9UMX3 212 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 ZGRF1Q86YA3 2104 aa17.44■□□□□ 0.38
PDLIM7-204ENST00000393546 HS6ST1O60243 411 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 SCN2BO60939 215 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 NKX2-2O95096 273 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 UNC5CO95185 931 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 KCNH1O95259 989 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms