RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CNIH4Q9P003 139 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 NDRG2Q9UN36 371 aaKnown RBP17.7■□□□□ 0.42
CBX1-202ENST00000393408 ASB4Q9Y574 426 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 A0A1W2PR48 441 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 SYT5O00445 386 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 NTN1O95631 604 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 LALBAP00709 142 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 CSF2P04141 144 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 SOX18P35713 384 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 PPP3R1P63098 170 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 HTRA4P83105 476 aaPredicted RBP17.69■□□□□ 0.42
CBX1-202ENST00000393408 TRAM2Q15035 370 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 TYW3Q6IPR3 259 aaKnown RBP17.69■□□□□ 0.42
CBX1-202ENST00000393408 CCDC116Q8IYX3 515 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 OR2A1Q8NGT9 310 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 FRMD6Q96NE9 622 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 FERD3LQ96RJ6 166 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 MACROD1Q9BQ69 325 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 SOSTQ9BQB4 213 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 RANGRFQ9HD47 186 aaPredicted RBP17.69■□□□□ 0.42
CBX1-202ENST00000393408 SEMA4GQ9NTN9 838 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 GPR55Q9Y2T6 319 aaPredicted RBP17.69■□□□□ 0.42
CBX1-202ENST00000393408 BOLA1Q9Y3E2 137 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 ATG4BQ9Y4P1 393 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 LAMA3Q16787 3333 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 FRS3O43559 492 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 SCO2O43819 266 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 TIMP1P01033 207 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 HLA-DQB1P01920 261 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 BCL6P41182 706 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 VIPR2P41587 438 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 SLC1A3P43003 542 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 MADCAM1Q13477 382 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 MLF2Q15773 248 aaPredicted RBP17.69■□□□□ 0.42
CBX1-202ENST00000393408 WSCD2Q2TBF2 565 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 ZNF311Q5JNZ3 666 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 TMEM107Q6UX40 140 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 LHFPL3Q86UP9 236 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 C11orf74Q86VG3 221 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 POGLUT1Q8NBL1 392 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 SIMC1Q8NDZ2 872 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 TTLQ8NG68 377 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 OR56A1Q8NGH5 318 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 OR8K5Q8NH50 307 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 NR4A3Q92570 626 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 DIO2Q92813 273 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 FAM46AQ96IP4 442 aaKnown RBP17.69■□□□□ 0.42
CBX1-202ENST00000393408 ZFYVE19Q96K21 471 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 HDAC8Q9BY41 377 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 XKR8Q9H6D3 395 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 DEC1Q9P2X7 70 aa17.69■□□□□ 0.42
CBX1-202ENST00000393408 OTOL1A6NHN0 477 aaPredicted RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 HNRNPA1P09651 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
CBX1-202ENST00000393408 APEX1P27695 318 aaKnown RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 OMPP47874 163 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 MLLT1Q03111 559 aaPredicted RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 CLEC12AQ5QGZ9 265 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 LCN1P1Q5VSP4 162 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 MRM1Q6IN84 353 aaKnown RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 MS4A6EQ96DS6 147 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 FYTTD1Q96QD9 318 aaKnown RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 INSM2Q96T92 566 aaPredicted RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 PRRG3Q9BZD7 231 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 SLC38A1Q9H2H9 487 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 PPP1R3EQ9H7J1 279 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 COMMD3Q9UBI1 195 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 LIPT1Q9Y234 373 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 MRPS23Q9Y3D9 190 aaKnown RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 A0A1W2PS29 197 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 ANKRD34BA5PLL1 514 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 IGLON5A6NGN9 336 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 CPSF4LA6NMK7 179 aaKnown RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 CASKO14936 926 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 HCN1O60741 890 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 HIST1H1TP22492 207 aaPredicted RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 MLLT3P42568 568 aaPredicted RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 CDH11P55287 796 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 PIP5KL1Q5T9C9 394 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 CNIH2Q6PI25 160 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 NOXA1Q86UR1 476 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 VRK2Q86Y07 508 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 UBE2J2Q8N2K1 259 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 RAB42Q8N4Z0 105 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 ARIH2OSQ8N7S6 290 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 ENKURQ8TC29 256 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 KLK6Q92876 244 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 RAB7BQ96AH8 199 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 MOAP1Q96BY2 351 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 ZG16BQ96DA0 208 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 C12orf66Q96MD2 445 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 OR7D2Q96RA2 312 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 DCLRE1CQ96SD1 692 aaKnown RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 TMEM246Q9BRR3 403 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 PRDM7Q9NQW5 492 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 PAQR5Q9NXK6 330 aaPredicted RBP17.68■□□□□ 0.42
CBX1-202ENST00000393408 CHST2Q9Y4C5 530 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 MYO7AQ13402 2215 aa17.68■□□□□ 0.42
CBX1-202ENST00000393408 CENPBD1B2RD01 187 aa17.67■□□□□ 0.42
CBX1-202ENST00000393408 ERI3O43414 337 aaKnown RBP17.67■□□□□ 0.42
CBX1-202ENST00000393408 CHRNEQ04844 493 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms