RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DNAAF1Q8NEP3 725 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 OR14K1Q8NGZ2 314 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 RNF31Q96EP0 1072 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 GPR61Q9BZJ8 451 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 POLR2J3Q9H1A7 115 aaKnown RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 XYLT2Q9H1B5 865 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MINDY3Q9H8M7 445 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 LRTM1Q9HBL6 345 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CRLF2Q9HC73 371 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 GALPQ9UBC7 116 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 TMEFF2Q9UIK5 374 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 A0A1B0GWJ7 208 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CD8B2A6NJW9 211 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 A8MXK9 166 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 E7EQ34 232 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CLIC1O00299 241 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 UPK1AO00322 258 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 GOSR2O14653 212 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 GPR182O15218 404 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 LRRTM2O43300 516 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 TGOLN2O43493 480 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 GMFGO60234 142 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CLN5O75503 358 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 GLUD1P00367 558 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 OTCP00480 354 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 EBLN1P0CF75 366 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CD8BP10966 210 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PSMA3P25788 255 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PTPN3P26045 913 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PCSK1P29120 753 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CHI3L1P36222 383 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PNPLA4P41247 253 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 TSPAN7P41732 249 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 C21orf58P58505 322 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CAMK2DQ13557 499 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 INTS6LQ5JSJ4 861 aaKnown RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MLIPQ5VWP3 458 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 OR52W1Q6IF63 320 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SERINC5Q86VE9 423 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SYT12Q8IV01 421 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF283Q8N7M2 679 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 C1orf216Q8TAB5 229 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 FIZ1Q96SL8 496 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PLCXD1Q9NUJ7 323 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SAGE1Q9NXZ1 904 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF223Q9UK11 482 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 FBXL21Q9UKT6 434 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 A0A087WZY1 265 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PRKRAO75569 313 aaKnown RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 C1QAP02745 245 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 FGF2P09038 288 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CNR1P21554 472 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 DDTP30046 118 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SRP9P49458 86 aaKnown RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 EVX1P49640 407 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SORDQ00796 357 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MBTPS1Q14703 1052 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SCGB2B2Q4G0G5 96 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SYTL3Q4VX76 610 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PRAMEF17Q5VTA0 474 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 HACD4Q5VWC8 232 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MTFR2Q6P444 385 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PRSS55Q6UWB4 352 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 LRRC28Q86X40 367 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 NAXDQ8IW45 347 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 PROKR2Q8NFJ6 384 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 NT5C3BQ969T7 300 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MED8Q96G25 268 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CDK15Q96Q40 435 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 POLR1EQ9GZS1 481 aaKnown RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 TSPAN10Q9H1Z9 355 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 DDIT4Q9NX09 232 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SH3BGRL2Q9UJC5 107 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 A0A1W2PRB8 838 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 PPP6CO00743 305 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 FZD7O75084 574 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 NCR1O76036 304 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GNRH1P01148 92 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 IFNGP01579 166 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OPN1SWP03999 348 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GIPP09681 153 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SLC2A1P11166 492 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ABCD3P28288 659 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SPAM1P38567 509 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SLC11A2P49281 568 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 LUMP51884 338 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 NAE1Q13564 534 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ODF4Q2M2E3 257 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 BEX5Q5H9J7 111 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 SAPCD1Q5SSQ6 148 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 NUDT13Q86X67 352 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 PUSL1Q8N0Z8 303 aaKnown RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF548Q8NEK5 533 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OR2A12Q8NGT7 310 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 HMGCLL1Q8TB92 370 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GPR152Q8TDT2 470 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 OR8D1Q8WZ84 308 aa7.23□□□□□ -1.25
VTI1A-201ENST00000393077 GCDHQ92947 438 aaPredicted RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 ADAT1Q9BUB4 502 aaKnown RBP7.23□□□□□ -1.25
VTI1A-201ENST00000393077 R3HDMLQ9H3Y0 253 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms