RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PDGFRLQ15198 375 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ATG9BQ674R7 924 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 STEAP4Q687X5 459 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 FITM2Q8N6M3 262 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 LRFN5Q96NI6 719 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 NICN1Q9BSH3 213 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 JMJD7P0C870 316 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 IL32P24001 234 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 BAMBIQ13145 260 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 TMEM173Q86WV6 379 aaPredicted RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 CHDHQ8NE62 594 aaPredicted RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 OR5M3Q8NGP4 307 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 OR51Q1Q8NH59 317 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 CNTNAP3Q9BZ76 1288 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 OR11A1Q9GZK7 315 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ASCC3Q8N3C0 2202 aaKnown RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF736B4DX44 427 aaPredicted RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 IL3RAP26951 378 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 DAOAP59103 153 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 SGK3Q96BR1 496 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 PIP5K1AQ99755 562 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 POMT1Q9Y6A1 747 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 KLK1P06870 262 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 NUDT1P36639 197 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 PCBP2Q15366 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 NRROSQ86YC3 692 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 HPSE2Q8WWQ2 592 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 COG8Q96MW5 612 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 POPDC3Q9HBV1 291 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 SLC6A5Q9Y345 797 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 FAM180BQ6P0A1 224 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 RFPL4BQ6ZWI9 263 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 C4orf32Q8N8J7 132 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 C2CD4BA6NLJ0 364 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 NSA2O95478 260 aaKnown RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 PENKP01210 267 aaPredicted RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 HLA-DOBP13765 273 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 DAP3P51398 398 aaKnown RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 RANP62826 216 aaKnown RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 KCTD20Q7Z5Y7 419 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 MYOTQ9UBF9 498 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 DCNP07585 359 aaKnown RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 ACP5P13686 325 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 RCAN2Q14206 197 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF776Q68DI1 518 aaPredicted RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 B3GNT7Q8NFL0 401 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 OR9K2Q8NGE7 335 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 NIPSNAP3BQ9BS92 247 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 ACSL6Q9UKU0 697 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 SNAP29O95721 258 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 TK1P04183 234 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 ATP1B2P14415 290 aaPredicted RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 HTR3AP46098 478 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 DHPSP49366 369 aaPredicted RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 PCBD1P61457 104 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 CSNK2A1P68400 391 aaPredicted RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 ANKRD54Q6NXT1 300 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 CNTN4Q8IWV2 1026 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 CSNK2A3Q8NEV1 391 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 STEAP2Q8NFT2 490 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 NDNFQ8TB73 568 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 SH3RF2Q8TEC5 729 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 C11orf84Q9BUA3 381 aaPredicted RBP14.06□□□□□ -0.16
CCDC50-201ENST00000392455 SLC2A8Q9NY64 477 aa14.06□□□□□ -0.16
CCDC50-201ENST00000392455 PLSCR5A0PG75 271 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 OR6C65A6NJZ3 312 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 SOCS5O75159 536 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 TMEM63AO94886 807 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 ADH5P11766 374 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 APLNRP35414 380 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 KHDC1Q4VXA5 237 aaKnown RBP14.05□□□□□ -0.16
CCDC50-201ENST00000392455 PLEKHS1Q5SXH7 462 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 FAM205BPQ63HN1 556 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 SYT13Q7L8C5 426 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 CAPNS2Q96L46 248 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 ATF6BQ99941 703 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 CACNG6Q9BXT2 260 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 SOX17Q9H6I2 414 aaPredicted RBP14.05□□□□□ -0.16
CCDC50-201ENST00000392455 IRF4Q15306 451 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 LPCAT3Q6P1A2 487 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 TFAP2BQ92481 460 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 DOHHQ9BU89 302 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 KLHL42Q9P2K6 505 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 PARP4Q9UKK3 1724 aaKnown RBP14.05□□□□□ -0.16
CCDC50-201ENST00000392455 A0A0U1RQK1 487 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 STATHP02808 62 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 AKAIN1P0CW23 69 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 CELP19835 753 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 BDKRB1P46663 353 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 PRKCZQ05513 592 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 SGCAQ16586 387 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 PNCKQ6P2M8 343 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 MAMDC2Q7Z304 686 aaPredicted RBP14.05□□□□□ -0.16
CCDC50-201ENST00000392455 SULF2Q8IWU5 870 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 KDF1Q8NAX2 398 aaPredicted RBP14.05□□□□□ -0.16
CCDC50-201ENST00000392455 LFNGQ8NES3 379 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF461Q8TAF7 563 aa14.05□□□□□ -0.16
CCDC50-201ENST00000392455 B3GNT3Q9Y2A9 372 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms