RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 FAM98AQ8NCA5 519 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CATSPER1Q8NEC5 780 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PAQR8Q8TEZ7 354 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 HOXB13Q92826 284 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SPACA9Q96E40 222 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 FAM120BQ96EK7 910 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ITCHQ96J02 903 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 MAGED4Q96JG8 741 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 MS4A4EQ96PG1 132 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SIGLEC12Q96PQ1 595 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PANX1Q96RD7 426 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CCT8L2Q96SF2 557 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 LMF2Q9BU23 707 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 TMEM120AQ9BXJ8 343 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ITPAQ9BY32 194 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NXF5Q9H1B4 397 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 Q9N2J8 555 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 DUSP22Q9NRW4 184 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SIRT3Q9NTG7 399 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ZCCHC3Q9NUD5 404 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 FAF1Q9UNN5 650 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 DTX4Q9Y2E6 619 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PCDHGB3Q9Y5G1 929 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SNX8Q9Y5X2 465 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 COPG1Q9Y678 874 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF462Q96JM2 2506 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CCDC154A6NI56 674 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 TTLL8A6PVC2 850 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 RFXANKO14593 260 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SLC22A2O15244 555 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 NME2P1O60361 137 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF354AO60765 605 aaPredicted RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CCDC22O60826 627 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 OR6B1O95007 311 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SNX4O95219 450 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 KCNH1O95259 989 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CPSF4O95639 269 aaKnown RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 AGR2O95994 175 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CRYABP02511 175 aaKnown RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 P04436 131 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 HMGN2P05204 90 aaKnown RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ABCB1P08183 1280 aaPredicted RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ALOX5P09917 674 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 NME2P22392 152 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 LCN1P31025 176 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 GABRA3P34903 492 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 PTGER1P34995 402 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 PIGAP37287 484 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ANXA11P50995 505 aaKnown RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 DGKQP52824 942 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 PRKAG1P54619 331 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF155Q12901 538 aaPredicted RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SNTA1Q13424 505 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 GAB1Q13480 694 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 EFR3AQ14156 821 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 RCAN2Q14206 197 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 DECR1Q16698 335 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 GKAP1Q5VSY0 366 aaPredicted RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CGB2Q6NT52 195 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 MFSD12Q6NUT3 480 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CDC73Q6P1J9 531 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 PAOXQ6QHF9 649 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 LYPD8Q6UX82 237 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 C6orf120Q7Z4R8 191 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 GALNTL5Q7Z4T8 443 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 MDGA2Q7Z553 956 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CPLX4Q7Z7G2 160 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF227Q86WZ6 799 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 FUNDC1Q8IVP5 155 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SLC44A2Q8IWA5 706 aaPredicted RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CLECL1Q8IZS7 167 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ANKS4BQ8N8V4 417 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 Q8NA96 180 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 PSD4Q8NDX1 1056 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SIMC1Q8NDZ2 872 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 OR4A15Q8NGL6 344 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ADAMTS15Q8TE58 950 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 NUDT8Q8WV74 236 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 TMCO6Q96DC7 493 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 OMA1Q96E52 524 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SPDL1Q96EA4 605 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 GIMAP5Q96F15 307 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 THOC1Q96FV9 657 aaKnown RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SLC35A4Q96G79 324 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 MARK4Q96L34 752 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 STACQ99469 402 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 BARD1Q99728 777 aaKnown RBP6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ACTRT3Q9BYD9 372 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 PIGUQ9H490 435 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CXorf36Q9H7Y0 433 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ANKRA2Q9H9E1 313 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 HHATLQ9HCP6 504 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SH2D2AQ9NP31 389 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 AGPAT4Q9NRZ5 378 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 SACM1LQ9NTJ5 587 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 ANKRD10Q9NXR5 420 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CCDC167Q9P0B6 97 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms