RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 COL21A1Q96P44 957 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 GNRHR2Q96P88 292 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 DMRTA2Q96SC8 542 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 EXO5Q9H790 373 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 HRH3Q9Y5N1 445 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 LIPGQ9Y5X9 500 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 CRYBG3Q68DQ2 2970 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 NCKAP5O14513 1909 aa12.98□□□□□ -0.33
IGHV3-48-201ENST00000390624 PDPK1O15530 556 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ICOSLGO75144 302 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 UGT2B11O75310 529 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 SKAP2O75563 359 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 LYPLA1O75608 230 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ELAVL4P26378 380 aaKnown RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 GDF1P27539 372 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 SLC1A6P48664 564 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 PNLIPRP2P54317 469 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 MANFP55145 182 aaKnown RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 PDE7AQ13946 482 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 C6orf136Q5SQH8 315 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 FNDC7Q5VTL7 733 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 DESI1Q6ICB0 168 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 TMEM211Q6ICI0 200 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ANKRD26P1Q6NSI1 321 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 OR1J4Q8NGS1 313 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 CLHC1Q8NHS4 586 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZBED6CLQ96FA7 236 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 NODALQ96S42 347 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ADOQ96SZ5 270 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 RAP2CQ9Y3L5 183 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 OR10H1Q9Y4A9 318 aa12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 KLF2Q9Y5W3 355 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 NCOA6Q14686 2063 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-48-201ENST00000390624 NBPF19A0A087WUL8 3843 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 PRSS44E7EML9 344 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 TSPAN2O60636 221 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 TRAPPC6AO75865 159 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 PSMG1O95456 288 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 PRPS2P11908 318 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 IL12BP29460 328 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 GPC1P35052 558 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 RPL3P39023 403 aaKnown RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 FRKP42685 505 aaPredicted RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 RPL14P50914 215 aaKnown RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 PSG6Q00889 435 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZNF155Q12901 538 aaPredicted RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 HSPB3Q12988 150 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 MAD2L1Q13257 205 aaPredicted RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 STX3Q13277 289 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 EFR3AQ14156 821 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZNHIT3Q15649 155 aaPredicted RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 CYP27C1Q4G0S4 372 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZNF385BQ569K4 471 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 WLSQ5T9L3 541 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 HHATQ5VTY9 493 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 IL23RQ5VWK5 629 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 TIGD3Q6B0B8 471 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 SP5Q6BEB4 398 aaPredicted RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 LARP4Q71RC2 724 aaKnown RBP eCLIP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 KIRREL3Q8IZU9 778 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 LIX1Q8N485 282 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZNF781Q8N8C0 355 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 FNDC5Q8NAU1 212 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 OR5M9Q8NGP3 310 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZFP28Q8NHY6 868 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 NEIL3Q8TAT5 605 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 CIDECQ96AQ7 238 aaPredicted RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 TUBGCP3Q96CW5 907 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 SLC35A4Q96G79 324 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 C20orf27Q9GZN8 174 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 PNPLA3Q9NST1 481 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 KLRF1Q9NZS2 232 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 GIMAP2Q9UG22 337 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 ATP6V1HQ9UI12 483 aa12.96□□□□□ -0.33
IGHV3-48-201ENST00000390624 PCNX1Q96RV3 2341 aa12.96□□□□□ -0.34
IGHV3-48-201ENST00000390624 FREM3P0C091 2139 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 C2orf72A6NCS6 295 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 PRAMEF25A6NGN4 478 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 TTC36A6NLP5 189 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 GNB5O14775 395 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 SCAMP2O15127 329 aaKnown RBP12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 HPNP05981 417 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 BGNP21810 368 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 ACVR2AP27037 513 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 HPCAL1P37235 193 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 DCTP40126 519 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 PTGDSP41222 190 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 MRPS22P82650 360 aaKnown RBP12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 SMU1Q2TAY7 513 aa12.95□□□□□ -0.34
IGHV3-48-201ENST00000390624 ZNF585AQ6P3V2 769 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms