RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SYNRGQ9UMZ2 1314 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 IGLV3-16A0A075B6K0 115 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 NPIPA5A0A0B4J1W7 369 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 NPIPA5E9PKD4 350 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 C11orf98E9PRG8 122 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 OR7A17O14581 309 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 TBCAO75347 108 aaKnown RBP1.93□□□□□ -2.1
TRAV40-201ENST00000390467 ZNF254O75437 659 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 GMNNO75496 209 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 GPX5O75715 221 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 GHRP10912 638 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 PEX19P40855 299 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 TDO2P48775 406 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 SLC26A2P50443 739 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 WASHC5Q12768 1159 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 BFSP1Q12934 665 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 IL18R1Q13478 541 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 SMC1AQ14683 1233 aaKnown RBP1.93□□□□□ -2.1
TRAV40-201ENST00000390467 ARMC3Q5W041 872 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 EGFL6Q8IUX8 553 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 CLYBLQ8N0X4 340 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 TPRX1Q8N7U7 411 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 FBXO30Q8TB52 745 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 STARD4Q96DR4 205 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 TRIM44Q96DX7 344 aaPredicted RBP1.93□□□□□ -2.1
TRAV40-201ENST00000390467 DNAJA3Q96EY1 480 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 OR51J1Q9H342 316 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 MAGEF1Q9HAY2 307 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 MEPEQ9NQ76 525 aaPredicted RBP1.93□□□□□ -2.1
TRAV40-201ENST00000390467 CYTL1Q9NRR1 136 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 ACOXLQ9NUZ1 547 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 ODF2LQ9ULJ1 636 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 ISY1Q9ULR0 285 aaKnown RBP1.93□□□□□ -2.1
TRAV40-201ENST00000390467 RLFQ13129 1914 aa1.93□□□□□ -2.1
TRAV40-201ENST00000390467 PDLIM1O00151 329 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 EI24O14681 340 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 HMMRO75330 724 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 ACADSBP45954 432 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 SERPINH1P50454 418 aaKnown RBP1.92□□□□□ -2.1
TRAV40-201ENST00000390467 METAP1P53582 386 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 PUDPQ08623 228 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 DAZ2Q13117 558 aaKnown RBP1.92□□□□□ -2.1
TRAV40-201ENST00000390467 ORC2Q13416 577 aaPredicted RBP1.92□□□□□ -2.1
TRAV40-201ENST00000390467 ZNF630Q2M218 657 aaPredicted RBP1.92□□□□□ -2.1
TRAV40-201ENST00000390467 KBTBD12Q3ZCT8 623 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 PRR5LQ6MZQ0 368 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 TRPM8Q7Z2W7 1104 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 PYROXD2Q8N2H3 581 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 NKAIN3Q8N8D7 197 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 OR52J3Q8NH60 311 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 OR4A16Q8NH70 328 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 KIR2DL5BQ8NHK3 375 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 ADAMTS16Q8TE57 1224 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 ZNF721Q8TF20 911 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 P3H4Q92791 437 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 CCDC47Q96A33 483 aaKnown RBP1.92□□□□□ -2.1
TRAV40-201ENST00000390467 RAB39BQ96DA2 213 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 IL4I1Q96RQ9 567 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 APOOQ9BUR5 198 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 NANOGQ9H9S0 305 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 NTN4Q9HB63 628 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 EXOSC3Q9NQT5 275 aaKnown RBP1.92□□□□□ -2.1
TRAV40-201ENST00000390467 DAZ3Q9NR90 486 aaKnown RBP1.92□□□□□ -2.1
TRAV40-201ENST00000390467 CNIH4Q9P003 139 aa1.92□□□□□ -2.1
TRAV40-201ENST00000390467 MMP23AO75900 390 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 ECDO95905 644 aaPredicted RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 HPNP05981 417 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 H2AFZP0C0S5 128 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 TOP1P11387 765 aaKnown RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 CYP11B1P15538 503 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 FCARP24071 287 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 GPC3P51654 580 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 RAG2P55895 527 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 ASIC1P78348 528 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 BCL2L1Q07817 233 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 ZKSCAN8Q15776 578 aaPredicted RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 MPPED2Q15777 294 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 SHROOM1Q2M3G4 852 aaPredicted RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 TYSND1Q2T9J0 566 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 GPAT3Q53EU6 434 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 SLC10A5Q5PT55 438 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 ZNF691Q5VV52 312 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 ZNF57Q68EA5 555 aaPredicted RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 ASPHD2Q6ICH7 369 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 CXCL17Q6UXB2 119 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 TSEN54Q7Z6J9 526 aaKnown RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 NOL4LQ96MY1 436 aaPredicted RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 ZMAT2Q96NC0 199 aaKnown RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 STARD5Q9NSY2 213 aa1.91□□□□□ -2.1
TRAV40-201ENST00000390467 FOXA2Q9Y261 457 aaPredicted RBP1.91□□□□□ -2.1
TRAV40-201ENST00000390467 SDC3O75056 442 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 WISP3O95389 354 aaPredicted RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 TIMP1P01033 207 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 GLULP15104 373 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF44P15621 663 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 VCLP18206 1134 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 SDC1P18827 310 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 SMSP52788 366 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF45Q02386 682 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 TLE4Q04727 773 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms