RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CD59P13987 128 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 CSTF2P33240 577 aaKnown RBP eCLIP11.36□□□□□ -0.599e-7■■■■□ 24.6
SPTBN1-203ENST00000389980 DCTP40126 519 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 STT3AP46977 705 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 CLDN6P56747 220 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 MAP4K2Q12851 820 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 ELOAQ14241 798 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 ATAD3BQ5T9A4 648 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 RHBDD2Q6NTF9 364 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 RBM45Q8IUH3 476 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 AMER2Q8N7J2 671 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 SUMF1Q8NBK3 374 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 CLIP3Q96DZ5 547 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 AMBRA1Q9C0C7 1298 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 FBXO34Q9NWN3 711 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 ERVK-19Q9WJR5 959 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 PCDHGB2Q9Y5G2 931 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 KNTC1P50748 2209 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 PCNX2A6NKB5 2137 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 PFDN1O60925 122 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 PDE9AO76083 593 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF806P0C7X5 589 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 CCL4P13236 92 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 TNNI3P19429 210 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ACP1P24666 158 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 HSPA13P48723 471 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF155Q12901 538 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 HEPHL1Q6MZM0 1159 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 COX15Q7KZN9 410 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 PIWIL3Q7Z3Z3 882 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ZDHHC13Q8IUH4 622 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 OR4D11Q8NGI4 311 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 VANGL1Q8TAA9 524 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 BBS10Q8TAM1 723 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 GPR151Q8TDV0 419 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 TRNT1Q96Q11 434 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 OR1F2PQ96R84 312 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 BCL2L10Q9HD36 194 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 PADI2Q9Y2J8 665 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 TESMINQ9Y4I5 508 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 GXYLT2A0PJZ3 443 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 DUXAA6NLW8 204 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 TNFRSF10AO00220 468 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 PRKNO60260 465 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 SERPINB7O75635 380 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ALOX5P09917 674 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 SMIM18P0DKX4 95 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ATP6V1B1P15313 513 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 RRM2P31350 389 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 GABRA3P34903 492 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 KCNJ5P48544 419 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 EMDP50402 254 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 RNF144AP50876 292 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 RAB15P59190 212 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ZFP36L1Q07352 338 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 GANABQ14697 944 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 EXOSC6Q5RKV6 272 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 YOD1Q5VVQ6 348 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 PPP1R3BQ86XI6 285 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 VRK2Q86Y07 508 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 KRT73Q86Y46 540 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 LACC1Q8IV20 430 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 CHERPQ8IWX8 916 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 METTL25Q8N6Q8 603 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF321PQ8N8H1 164 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 CDRT4Q8N9R6 151 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 OR52J3Q8NH60 311 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 APOBEC4Q8WW27 367 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 GEMIN6Q8WXD5 167 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 PMEPA1Q969W9 287 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 EDEM2Q9BV94 578 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 SOX17Q9H6I2 414 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 EXD2Q9NVH0 621 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 TBCCD1Q9NVR7 557 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 RHCGQ9UBD6 479 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 MKL2Q9ULH7 1088 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 SRPK3Q9UPE1 567 aa11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 SAMHD1Q9Y3Z3 626 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 COL27A1Q8IZC6 1860 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-203ENST00000389980 FREM2Q5SZK8 3169 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NPIPA5A0A0B4J1W7 369 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 A0A0G2JPF8 293 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 CENPVL1A0A0U1RR11 272 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 PRR33A8MZF0 331 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 C17orf105B2RV13 164 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 HNRNPCL2B2RXH8 293 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 HNRNPCL3B7ZW38 293 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NPIPA7E9PJI5 369 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 M0R3H8 397 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 SLITRK5O94991 958 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 SNAP29O95721 258 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 EPPINO95925 133 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NPIPA8P0DM63 369 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 HNRNPCL4P0DMR1 293 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 RFX3P48380 749 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 RHAGQ02094 409 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 GNA13Q14344 377 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NNATQ16517 81 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 ZIK1Q3SY52 487 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NHSL2Q5HYW2 709 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms