RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ZNF419Q96HQ0 510 aaPredicted RBP12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 FAM46AQ96IP4 442 aaKnown RBP12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 TEX37Q96LM6 180 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 RDH12Q96NR8 316 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 CDX2Q99626 313 aaPredicted RBP12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 TMEM185BQ9H7F4 350 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 MUTYHQ9UIF7 546 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 ATXN7L1Q9ULK2 861 aaPredicted RBP12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 GRXCR2A6NFK2 248 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 FAM227AF5H4B4 570 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 PPM1BO75688 479 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 CD160O95971 181 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 DCTP40126 519 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 CDKN2CP42773 168 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 CCR5P51681 352 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 ST3GAL4Q11206 333 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 IL18Q14116 193 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 MAPK14Q16539 360 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 ABHD17CQ6PCB6 329 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 SYT13Q7L8C5 426 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 TOR1AIP2Q8NFQ8 470 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 ACSS1Q9NUB1 689 aaPredicted RBP12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 VDAC3Q9Y277 283 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 WDR37Q9Y2I8 494 aa12.35□□□□□ -0.43
PTPRN2-202ENST00000389416 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 RIF1Q5UIP0 2472 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 RGPD4Q7Z3J3 1758 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 PRAMEF33A0A0G2JMD5 474 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 TRAPPC13A5PLN9 417 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 UNC119BA6NIH7 251 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 CPNE6O95741 557 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 IL33O95760 270 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 PEPDP12955 493 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 EDNRAP25101 427 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 OR2B6P58173 313 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 LTB4RQ15722 352 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 ETFBKMTQ8IXQ9 262 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 ADGRG5Q8IZF4 528 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 NKD1Q969G9 470 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 C16orf58Q96GQ5 468 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 COX4I2Q96KJ9 171 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 OR52A5Q9H2C5 316 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 ADAM29Q9UKF5 820 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 RBM7Q9Y580 266 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 PCDHA9Q9Y5H5 950 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 NCOR1O75376 2440 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 TRPM6Q9BX84 2022 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 VSTM2BA6NLU5 285 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 KHDRBS3O75525 346 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 RPS3AP61247 264 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 TSTQ16762 297 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 ZNF750Q32MQ0 723 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 OR5M10Q6IEU7 315 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 MEX3DQ86XN8 651 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 OR6N2Q8NGY6 317 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 COQ8BQ96D53 544 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 HS6ST2Q96MM7 605 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 ZNF300Q96RE9 604 aaPredicted RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 TM9SF2Q99805 663 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 NKIRAS2Q9NYR9 191 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 COMMD3Q9UBI1 195 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 PLPP1O14494 284 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 TFECO14948 347 aaPredicted RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 BRINP1O60477 761 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 FURINP09958 794 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 C6orf141Q5SZD1 244 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 DCST2Q5T1A1 773 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 C1orf94Q6P1W5 598 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 RCBTB1Q8NDN9 531 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 SLC41A3Q96GZ6 507 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 OR7D2Q96RA2 312 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 MRPL39Q9NYK5 338 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 PCDHGB1Q9Y5G3 927 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 CCNOP22674 350 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 HSD11B1P28845 292 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 NAA10P41227 235 aaPredicted RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 IL18R1Q13478 541 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 GPR19Q15760 415 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 ADNP2Q6IQ32 1131 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 RNASE11Q8TAA1 199 aaKnown RBP12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 EID2BQ96D98 161 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 LRRC3BQ96PB8 259 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 SLC29A1Q99808 456 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 TMED9Q9BVK6 235 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 CNIH4Q9P003 139 aa12.34□□□□□ -0.43
PTPRN2-202ENST00000389416 GREB1LQ9C091 1923 aaPredicted RBP12.33□□□□□ -0.43
PTPRN2-202ENST00000389416 H3BML4 177 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 H3BSA7 217 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 MOSPD3O75425 235 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 TNFRSF17Q02223 184 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 ZP2Q05996 745 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 ZNF846Q147U1 533 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 MARCH9Q86YJ5 346 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 OR8J2Q8NGG1 315 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 FAR1Q8WVX9 515 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms