RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 GABRPO00591 440 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ADAM12O43184 909 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 NARSO43776 548 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TFP02787 698 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 PDGFAP04085 211 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 EFR3AQ14156 821 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 PRAMEF17Q5VTA0 474 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 PSRC1Q6PGN9 363 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 GLCCI1Q86VQ1 547 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 PTOV1Q86YD1 416 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF480Q8WV37 535 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 C1QTNF7Q9BXJ2 289 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■■ 27.2
TRAPPC9-201ENST00000389328 AK6Q9Y3D8 172 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRBV2A0A0J9YWF9 115 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TEX46H3BTG2 121 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 MT-ND4P03905 459 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 IL1RNP18510 177 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 GGTA1PQ4G0N0 100 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 PXDC1Q5TGL8 231 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 KHDRBS2Q5VWX1 349 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TAS1R1Q7RTX1 841 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 HSD11B1LQ7Z5J1 315 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 SERPINA12Q8IW75 414 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF740Q8NDX6 193 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TM9SF4Q92544 642 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRPV4Q9HBA0 871 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 CACNB4O00305 520 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC31A1O15431 190 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 CREBL2O60519 120 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 PRSS23O95084 383 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 CFL1P23528 166 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ITGA3P26006 1051 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF33BQ06732 778 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 RBM45Q8IUH3 476 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 SPAG16Q8N0X2 631 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TTLQ8NG68 377 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR6F1Q8NGZ6 308 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 UBTD2Q8WUN7 234 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ADAD1Q96M93 576 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF471Q9BX82 626 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 NIPAL2Q9H841 368 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TLR9Q9NR96 1032 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ACER3Q9NUN7 267 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 HPF1Q9NWY4 346 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TEX10Q9NXF1 929 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 UPB1Q9UBR1 384 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 C5orf51A6NDU8 294 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 GRPRP30550 384 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 SKP1P63208 163 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TAP2Q03519 686 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ILKQ13418 452 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 CCSMST1Q4G0I0 132 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 HES5Q5TA89 166 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 NDUFAF5Q5TEU4 345 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 RAB12Q6IQ22 244 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 GPALPP1Q8IXQ4 340 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR5J2Q8NH18 312 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 TREX2Q9BQ50 279 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 KXD1Q9BQD3 176 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 RNF208Q9H0X6 261 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 MKKSQ9NPJ1 570 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZSCAN32Q9NX65 697 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 ASIC5Q9NY37 505 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 FBXL3Q9UKT7 428 aa12.43□□□□□ -0.42
TRAPPC9-201ENST00000389328 UNC119BA6NIH7 251 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC25A12O75746 678 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 SCO1O75880 301 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 GRK6P43250 576 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 TAF13Q15543 124 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 MLIPQ5VWP3 458 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLX4IPQ5VYV7 408 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 FAHD1Q6P587 224 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 FAM198BQ6UWH4 519 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 LILRA3Q8N6C8 439 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 ELL3Q9HB65 397 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 KLHL21Q9UJP4 597 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 ACP2P11117 423 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 PRKCAP17252 672 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 PPM1AP35813 382 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC8B1Q6J4K2 584 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 BHLHA9Q7RTU4 235 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR52I1Q8NGK6 324 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRIM43Q96BQ3 446 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 MACROD1Q9BQ69 325 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 DPH7Q9BTV6 452 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 NT5DC2Q9H857 520 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 TREM1Q9NP99 234 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 COPZ2Q9P299 210 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 NOP16Q9Y3C1 178 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 PSMD9O00233 223 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 XKRYO14609 159 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 LAG3P18627 525 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 CBLP22681 906 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 VAMP1P23763 118 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms