RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 TRIM42Q8IWZ5 723 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 CCDC116Q8IYX3 515 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 EIF1ADQ8N9N8 165 aaKnown RBP24.02■■□□□ 1.44
NPHP3-202ENST00000383282 WDSUB1Q8N9V3 476 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 UHMK1Q8TAS1 419 aaKnown RBP24.02■■□□□ 1.44
NPHP3-202ENST00000383282 MBD6Q96DN6 1003 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 RBM24Q9BX46 236 aaKnown RBP24.02■■□□□ 1.44
NPHP3-202ENST00000383282 GIMAP4Q9NUV9 329 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 TAS2R10Q9NYW0 307 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 ZNF225Q9UK10 706 aa24.02■■□□□ 1.44
NPHP3-202ENST00000383282 GPR55Q9Y2T6 319 aaPredicted RBP24.02■■□□□ 1.44
NPHP3-202ENST00000383282 EXPH5Q8NEV8 1989 aa24.02■■□□□ 1.43
NPHP3-202ENST00000383282 MANBAO00462 879 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 RAF1P04049 648 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 SBK3P0C264 359 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 DRD2P14416 443 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 HMOX2P30519 316 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 SRD5A2P31213 254 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 SLCO1A2P46721 670 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 PSPHP78330 225 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 HMGCS1Q01581 520 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 KEAP1Q14145 624 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 ZNF628Q5EBL2 1059 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 GSPT2Q8IYD1 628 aaKnown RBP24.01■■□□□ 1.43
NPHP3-202ENST00000383282 SLC35A4Q96G79 324 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 ANKZF1Q9H8Y5 726 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 HEY2Q9UBP5 337 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 DLGAP4Q9Y2H0 992 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 WIF1Q9Y5W5 379 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 ABCA4P78363 2273 aa24.01■■□□□ 1.43
NPHP3-202ENST00000383282 GNG14A0A1W2PPG7 69 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 PCDH7O60245 1069 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 ULK1O75385 1050 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 RCBTB2O95199 551 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 IL3P08700 152 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 CHMP24386 653 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 IL12BP29460 328 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 EFR3AQ14156 821 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 HEPACAMQ14CZ8 416 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 TCHHL1Q5QJ38 904 aaPredicted RBP24■■□□□ 1.43
NPHP3-202ENST00000383282 LUZP2Q86TE4 346 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 TMEM151AQ8N4L1 468 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 GBP7Q8N8V2 638 aaPredicted RBP24■■□□□ 1.43
NPHP3-202ENST00000383282 WNT2BQ93097 391 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 BTBD9Q96Q07 612 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 ZNF382Q96SR6 550 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 DKKL1Q9UK85 242 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 STK38LQ9Y2H1 464 aa24■■□□□ 1.43
NPHP3-202ENST00000383282 CLCA1A8K7I4 914 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 GFRA1P56159 465 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 EEF1A1P68104 462 aaKnown RBP23.99■■□□□ 1.43
NPHP3-202ENST00000383282 ACSM2AQ08AH3 577 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 FOXF2Q12947 444 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 SPIN4Q56A73 249 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 ZNF678Q5SXM1 525 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 EEF1A1P5Q5VTE0 462 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 ACSM2BQ68CK6 577 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 GPRIN3Q6ZVF9 776 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 OR9A2Q8NGT5 310 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 METTL6Q8TCB7 284 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 EXOSC8Q96B26 276 aaKnown RBP23.99■■□□□ 1.43
NPHP3-202ENST00000383282 INTS12Q96CB8 462 aaKnown RBP23.99■■□□□ 1.43
NPHP3-202ENST00000383282 POM121Q96HA1 1249 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 SFXN2Q96NB2 322 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 UCN2Q96RP3 112 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 ADOQ96SZ5 270 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 PIGMQ9H3S5 423 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 SENP1Q9P0U3 644 aa23.99■■□□□ 1.43
NPHP3-202ENST00000383282 EXOC1LA0A1B0GW35 172 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 DIO3P55073 304 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 FOXD4Q12950 439 aaPredicted RBP23.98■■□□□ 1.43
NPHP3-202ENST00000383282 GAB1Q13480 694 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 UNC50Q53HI1 259 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 LARP4Q71RC2 724 aaKnown RBP eCLIP23.98■■□□□ 1.43
NPHP3-202ENST00000383282 ADGRE4PQ86SQ3 457 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.98■■□□□ 1.43
NPHP3-202ENST00000383282 KAT2AQ92830 837 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 MTBPQ96DY7 904 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 DACH2Q96NX9 599 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 KIAA1549Q9HCM3 1950 aa23.98■■□□□ 1.43
NPHP3-202ENST00000383282 CCDC151A5D8V7 595 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 CT45A8P0DMV1 189 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 CT45A9P0DMV2 189 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 STARP49675 285 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 MRPS22P82650 360 aaKnown RBP23.97■■□□□ 1.43
NPHP3-202ENST00000383282 DEFB113Q30KQ7 82 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 CT45A2Q5DJT8 189 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 FAM219BQ5XKK7 198 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 LCA5Q86VQ0 697 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 GRAMD2AQ8IUY3 354 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 FAM9CQ8IZT9 166 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 TMEM237Q96Q45 408 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 ACPTQ9BZG2 426 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 SHCBP1LQ9BZQ2 653 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 STMN4Q9H169 189 aaPredicted RBP23.97■■□□□ 1.43
NPHP3-202ENST00000383282 ANKRA2Q9H9E1 313 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 GALNT8Q9NY28 637 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 TAS2R9Q9NYW1 312 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 CLCF1Q9UBD9 225 aa23.97■■□□□ 1.43
NPHP3-202ENST00000383282 FBXL2Q9UKC9 423 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms