RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 LSM5Q9Y4Y9 91 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 PCDHB1Q9Y5F3 818 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ENTPD2Q9Y5L3 495 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CCDC187A0A096LP49 1063 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 LYRM1O43325 122 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 MT-CYBP00156 380 aaPredicted RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 GIPP09681 153 aaPredicted RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 HLA-EP13747 358 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PCMT1P22061 227 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 NME2P22392 152 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 GGT2P36268 569 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 GIPRP48546 466 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PRPS1P60891 318 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CRYZQ08257 329 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 CDONQ4KMG0 1287 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CELF3Q5SZQ8 465 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 SLC25A25Q6KCM7 469 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 C3orf33Q6P1S2 294 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CRYBG2Q8N1P7 616 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 Q8N402 240 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 KCNA7Q96RP8 456 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 FAM129BQ96TA1 746 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 MTERF1Q99551 399 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 DPH1Q9BZG8 443 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 HAPLN2Q9GZV7 340 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PLAC1Q9HBJ0 212 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CRLF2Q9HC73 371 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 SCUBE2Q9NQ36 999 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 WASH6PQ9NQA3 447 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ABCC13Q9NSE7 274 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 TEX10Q9NXF1 929 aaPredicted RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 LRIT1Q9P2V4 623 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 TIMM13Q9Y5L4 95 aaPredicted RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 SHANK3Q9BYB0 1731 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 BLOC1S5-TXNDC5H3BN57 136 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 B4GALT5O43286 388 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 GOT2P00505 430 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 ESR1P03372 595 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 TXNP10599 105 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 LHCGRP22888 699 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 S100A2P29034 98 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 AVPR2P30518 371 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 DGKQP52824 942 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 MXD1Q05195 221 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 HNRNPA0Q13151 305 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 OLIG2Q13516 323 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 TATDN3Q17R31 274 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PLA1AQ53H76 456 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PDZD11Q5EBL8 140 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 SLC35F1Q5T1Q4 408 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 HES5Q5TA89 166 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 METTL11BQ5VVY1 283 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 KIAA1161Q6NSJ0 714 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 TRIM40Q6P9F5 258 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 DHRS13Q6UX07 377 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 RPS27LQ71UM5 84 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 KCTD20Q7Z5Y7 419 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 ISCA2Q86U28 154 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 SPATA2LQ8IUW3 424 aaPredicted RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 RBFAQ8N0V3 343 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 IL17RCQ8NAC3 791 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 OR13C3Q8NGS6 347 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 OR5B3Q8NH48 314 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 MFSD8Q8NHS3 518 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PHYHIPQ92561 330 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 MRPS31Q92665 395 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 MR1Q95460 341 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 MRPL48Q96GC5 212 aaKnown RBP5.44□□□□□ -1.54
RFC1-202ENST00000381897 C12orf42Q96LP6 360 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CCDC140Q96MF4 163 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 AMBRA1Q9C0C7 1298 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 MS4A12Q9NXJ0 267 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 SLC2A6Q9UGQ3 507 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 PSORS1C1Q9UIG5 152 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 FBXO4Q9UKT5 387 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 RNF150Q9ULK6 438 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 CROCCQ5TZA2 2017 aa5.44□□□□□ -1.54
RFC1-202ENST00000381897 A0A1W2PQU0 124 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 ANKRD28O15084 1053 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 RAMP2O60895 175 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 PAGE1O75459 146 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 SCGB1D1O95968 90 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 ODC1P11926 461 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 SPNP16150 400 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 GABRB3P28472 473 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 HSD17B2P37059 387 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 PIGAP37287 484 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 GZMKP49863 264 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 SULT1A2P50226 295 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 RRAS2P62070 204 aaPredicted RBP5.43□□□□□ -1.54
RFC1-202ENST00000381897 SNRPD2P62316 118 aaKnown RBP5.43□□□□□ -1.54
RFC1-202ENST00000381897 FPGSQ05932 587 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 RGS1Q08116 209 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 SNTB2Q13425 540 aaKnown RBP5.43□□□□□ -1.54
RFC1-202ENST00000381897 GPR50Q13585 617 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 CATSPEREQ5SY80 951 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 KCTD11Q693B1 232 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 TMEM225Q6GV28 225 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 Q6ZN92 141 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 CXXC5Q7LFL8 322 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms