RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 KCTD7Q96MP8 289 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 MCOLN1Q9GZU1 580 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 IL20RAQ9UHF4 553 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 KIAA1549LQ6ZVL6 1849 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 SHISA3A0PJX4 238 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 SMLR1H3BR10 107 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 VEGFDO43915 354 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 HPGDSO60760 199 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 C8orf89P0DMQ9 161 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 PRKCAP17252 672 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 BUD31P41223 144 aaPredicted RBP15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 WNT4P56705 351 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 GALK2Q01415 458 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 IRF4Q15306 451 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 KIAA1211LQ6NV74 962 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 PARM1Q6UWI2 310 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 B3GLCTQ6Y288 498 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 RDH10Q8IZV5 341 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 FRMD6Q96NE9 622 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 TEFMQ96QE5 360 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 INSM2Q96T92 566 aaPredicted RBP15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 AIF1LQ9BQI0 150 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 POLDIP3Q9BY77 421 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 RNF121Q9H920 327 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 ZSCAN32Q9NX65 697 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 SF3B6Q9Y3B4 125 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 KIF26AQ9ULI4 1882 aaPredicted RBP15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 PSKH1P11801 424 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 MYL12AP19105 171 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC9A3P48764 834 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC30A8Q8IWU4 369 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D19Q8N5T2 526 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 DOK4Q8TEW6 326 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 FGF11Q92914 225 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 TMED9Q9BVK6 235 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 HDHD5Q9BXW7 423 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 MS4A8Q9BY19 250 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 RWDD3Q9Y3V2 267 aa15.29■□□□□ 0.04
NKX3-1-201ENST00000380871 OR6C70A6NIJ9 312 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 TMEM52BQ4KMG9 183 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 FAM46CQ5VWP2 391 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 DGLUCYQ7Z3D6 616 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 CADM2Q8N3J6 435 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 DTX3Q8N9I9 347 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 MORN4Q8NDC4 146 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 FGF14Q92915 247 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF607Q96SK3 696 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 DPEP2Q9H4A9 486 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 EPHX3Q9H6B9 360 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 CPNE3O75131 537 aaKnown RBP15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 CHRM4P08173 479 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 FGL2Q14314 439 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 SHHQ15465 462 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 TATDN3Q17R31 274 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 CNIH2Q6PI25 160 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 CLDN22Q8N7P3 220 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 ENKURQ8TC29 256 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 HCAR2Q8TDS4 363 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 GPR34Q9UPC5 381 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 KCNE3Q9Y6H6 103 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 HEATR5BQ9P2D3 2071 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 A0A1W2PRQ8 180 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 RPS5P46782 204 aaKnown RBP15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 RAB25P57735 213 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 CLDN2P57739 230 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 DPTQ07507 201 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 FUT5Q11128 374 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF730Q6ZMV8 503 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 TMEM145Q8NBT3 493 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 OR4F15Q8NGB8 312 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 ZG16BQ96DA0 208 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 ZBED6CLQ96FA7 236 aaPredicted RBP15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 MYADMQ96S97 322 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 MKRN2Q9H000 416 aaKnown RBP15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 GLIPR2Q9H4G4 154 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D17Q9HA65 648 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 NEUROD4Q9HD90 331 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 ZCCHC3Q9NUD5 404 aaKnown RBP15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 THAP10Q9P2Z0 257 aaPredicted RBP15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 COL4A3Q01955 1670 aa15.28■□□□□ 0.04
NKX3-1-201ENST00000380871 A0A1W2PQU0 124 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 CASKO14936 926 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 PDE9AO76083 593 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 APODP05090 189 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 LIMS3P0CW19 117 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 LIMS4P0CW20 117 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 SSR2P43308 183 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 RAB8AP61006 207 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 BNC1Q01954 994 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 PLK5Q496M5 336 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF628Q5EBL2 1059 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 UBE3DQ7Z6J8 389 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 YIPF7Q8N8F6 280 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 LINC01555Q8NAE3 123 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 TP53I13Q8NBR0 393 aaPredicted RBP15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 SFXN1Q9H9B4 322 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 AHSPQ9NZD4 102 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 NTNG1Q9Y2I2 539 aa15.27■□□□□ 0.04
NKX3-1-201ENST00000380871 EYSQ5T1H1 3165 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms