RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SACM1LQ9NTJ5 587 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 NOP53Q9NZM5 478 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 SEC14L3Q9UDX4 400 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 HAO1Q9UJM8 370 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 NPIPA1Q9UND3 350 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 DCHS2Q6V1P9 2916 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 A0A0G2JMM0 328 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 GOLGA8QA0A0J9YX86 632 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 A0A1W2PPB8 328 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 A0A1W2PRS3 328 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 GOLGA8OA6NCC3 632 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 KIR3DP1A8MWS1 328 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 GOLGA8NF8WBI6 632 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 SCAMP2O15127 329 aaKnown RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 HDAC3O15379 428 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PLOD3O60568 738 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 TBX19O60806 448 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 COQ9O75208 318 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 SNNO75324 88 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 UNC5CO95185 931 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 CBX6O95503 412 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 CCL3P10147 92 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF24P17028 368 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 LBPP18428 481 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 POU3F2P20265 443 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 EFNA1P20827 205 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 CNR1P21554 472 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 COL8A1P27658 744 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PIGAP37287 484 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PPICP45877 212 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 EMDP50402 254 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 MANFP55145 182 aaKnown RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 FBXW4P57775 412 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 KCNK10P57789 538 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 DCAF7P61962 342 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PPP2R2AP63151 447 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 OCRLQ01968 901 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 TAGLNQ01995 201 aaKnown RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PLGLB1Q02325 96 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PLCXD2Q0VAA5 305 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF155Q12901 538 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PDE7AQ13946 482 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 CPTPQ5TA50 214 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 C1QL3Q5VWW1 255 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF324BQ6AW86 544 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 GFRALQ6UXV0 394 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 GK5Q6ZS86 529 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 FAM47EQ6ZV65 393 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 WDR75Q8IWA0 830 aaKnown RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 DND1Q8IYX4 353 aaKnown RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 KRTCAP2Q8N6L1 136 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 POGLUT1Q8NBL1 392 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ST6GALNAC3Q8NDV1 305 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 OR2M7Q8NG81 312 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 OR7A2PQ8NGA2 310 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 OR10G3Q8NGC4 313 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ERP27Q96DN0 273 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 MTERF3Q96E29 417 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ELP4Q96EB1 424 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 PRPF18Q99633 342 aaKnown RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 SLX1AQ9BQ83 275 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 MEAF6Q9HAF1 191 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 FOLH1BQ9HBA9 442 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 DEPPQ9NTK1 212 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 DDX18Q9NVP1 670 aaKnown RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 TAS2R9Q9NYW1 312 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ATP6V1HQ9UI12 483 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 ERRFI1Q9UJM3 462 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-202ENST00000380747 OSGIN2Q9Y236 505 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 NPFFR2Q9Y5X5 522 aa8.5□□□□□ -1.05
HMGN1-202ENST00000380747 CCDC168Q8NDH2 2452 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 A0A087WV62 115 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 A0A1W2PRB8 838 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 PINLYPA6NC86 204 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 FRG2CA6NGY1 282 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 TRPC5OSA6NMA1 111 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 FAM166BA8MTA8 275 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SLCO1B7G3V0H7 640 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SDHDO14521 159 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 TP53I11O14683 189 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 KLF11O14901 512 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 TFECO14948 347 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ACOX3O15254 700 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ERN1O75460 977 aaKnown RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 WISP2O76076 250 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SLITRK5O94991 958 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 LAMP1P11279 417 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 PRPS1L1P21108 318 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 DRD5P21918 477 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ABCD3P28288 659 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 DNASE1L1P49184 302 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 TMED10P49755 219 aaKnown RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 CDK9P50750 372 aaKnown RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 TDGF1P3P51864 188 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 PRKAG1P54619 331 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 DIO3P55073 304 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms