RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 RNF139Q8WU17 664 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM176AQ96HP8 235 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 TMED9Q9BVK6 235 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 WDR26Q9H7D7 661 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 PIPOXQ9P0Z9 390 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 TP53TG5Q9Y2B4 290 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 C2orf92A0A1B0GVN3 265 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SOWAHBA6NEL2 793 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 RRP8O43159 456 aaKnown RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 CRTAPO75718 401 aaPredicted RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 IL1RNP18510 177 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 CXCR3P49682 368 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 HTR6P50406 440 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 FABP5Q01469 135 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SPIBQ01892 262 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC6A3Q01959 620 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 BIKQ13323 160 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM255AQ5JRV8 349 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SAPCD1Q5SSQ6 148 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 OR2G6Q5TZ20 316 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC27A1Q6PCB7 646 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 CNTN4Q8IWV2 1026 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM130Q8N3G9 435 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 DBF4BQ8NFT6 615 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 NEIL3Q8TAT5 605 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TGM7Q96PF1 710 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GAL3ST4Q96RP7 486 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 NFKBIZQ9BYH8 718 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 MYOZ2Q9NPC6 264 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 LHX9Q9NQ69 397 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 KCNIP3Q9Y2W7 256 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 NUP214P35658 2090 aaPredicted RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SLIT2O94813 1529 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 OR2T1O43869 369 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 KLHL18O94889 574 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 HIST1H2ABP04908 130 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 RHOP08100 348 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SNRPCP09234 159 aaKnown RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GIPP09681 153 aaPredicted RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 THEGLP0DJG4 465 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ANXA8P13928 327 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TNFRSF1BP20333 461 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 KDELR2P33947 212 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GAMTQ14353 236 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 OCLNQ16625 522 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 XKR7Q5GH72 579 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ARHGAP40Q5TG30 622 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 KCTD11Q693B1 232 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 HIST3H2AQ7L7L0 130 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 CDAN1Q8IWY9 1227 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 UBAC2Q8NBM4 344 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 PROKR2Q8NFJ6 384 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 MYLIPQ8WY64 445 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 HIST1H2ACQ93077 130 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 C20orf85Q9H1P6 137 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TSPAN16Q9UKR8 245 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 FZD4Q9ULV1 537 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ASF1AQ9Y294 204 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GOLT1BQ9Y3E0 138 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 OR14I1A6ND48 311 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ADH1AP07327 375 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SAGP10523 405 aaPredicted RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 BDKRB2P30411 391 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SDHAP31040 664 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 HCCSP53701 268 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GMFBP60983 142 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 CDK6Q00534 326 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GLO1Q04760 184 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TNFRSF9Q07011 255 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GRB14Q14449 540 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TGIF1Q15583 401 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 PLK5Q496M5 336 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ADAM5Q6NVV9 412 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 PGBD2Q6P3X8 592 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF551Q7Z340 670 aaPredicted RBP8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 C4orf19Q8IY42 314 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 GPR150Q8NGU9 434 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM143Q96AN5 459 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 LRIG1Q96JA1 1093 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 LRFN5Q96NI6 719 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 CLCC1Q96S66 551 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 ABHD1Q96SE0 405 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 EPYCQ99645 322 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 OCSTAMPQ9BR26 566 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 IFT27Q9BW83 186 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 DUSP16Q9BY84 665 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 PRDM13Q9H4Q3 707 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 SMCO4Q9NRQ5 59 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 RAI2Q9Y5P3 530 aa8.04□□□□□ -1.12
NHLRC3-201ENST00000379599 H7C1Q1 480 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 DPYSL4O14531 572 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 ARPC1BO15143 372 aaKnown RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 NTSR2O95665 410 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 THP07101 528 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 NR2F6P10588 404 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 MTHFD2P13995 350 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 CD1DP15813 335 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 GJA5P36382 358 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms