RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PIGRP01833 764 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 APEHP13798 732 aaKnown RBP12.67□□□□□ -0.38
HIPK3-202ENST00000379016 DDCP20711 480 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 TACR3P29371 465 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 VIPR2P41587 438 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 DESI1Q6ICB0 168 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 DLK2Q6UY11 383 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 STRADAQ7RTN6 431 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 OR2M7Q8NG81 312 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 C11orf84Q9BUA3 381 aaPredicted RBP12.67□□□□□ -0.38
HIPK3-202ENST00000379016 TGIF2Q9GZN2 237 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 SLAMF1Q13291 335 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 TMEM150AQ86TG1 271 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 NPAS4Q8IUM7 802 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 CCDC71Q8IV32 467 aaPredicted RBP12.67□□□□□ -0.38
HIPK3-202ENST00000379016 IL17RDQ8NFM7 739 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 NMNAT2Q9BZQ4 307 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 NANOGQ9H9S0 305 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 PLEK2Q9NYT0 353 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 MATN3O15232 486 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 SUSD5O60279 629 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 ADRA1BP35368 520 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 TDGQ13569 410 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 TRAM1Q15629 374 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 FAM198BQ6UWH4 519 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 OR4K1Q8NGD4 311 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 OR13C4Q8NGS5 318 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 OR4Q3Q8NH05 313 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PIGCQ92535 297 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 DERAQ9Y315 318 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 FBXO7Q9Y3I1 522 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 TMEM184BQ9Y519 407 aaPredicted RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 TIMM8AO60220 97 aaPredicted RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 CERS1P27544 350 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 IL2RGP31785 369 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 MLF1P58340 268 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 NSDHLQ15738 373 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 ZSWIM9Q86XI8 627 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 DAZLQ92904 295 aaKnown RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 DPEP3Q9H4B8 488 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 P4HTMQ9NXG6 502 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 APOFQ13790 326 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 TMIGD1Q6UXZ0 262 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 ABHD11Q8NFV4 315 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 TRMT2BQ96GJ1 504 aaKnown RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 HDHD5Q9BXW7 423 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 ADAMTS4O75173 837 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PNPP00491 289 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 OPN1LWP04000 364 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 OMGP23515 440 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 FAM214AQ32MH5 1076 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 YIF1BQ5BJH7 314 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 BEX5Q5H9J7 111 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF585AQ6P3V2 769 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 OR4A16Q8NH70 328 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 DTD1Q8TEA8 209 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 TBC1D20Q96BZ9 403 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 LINC00597Q9H2U6 94 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 BMXP51813 675 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PRAMEF8Q5VWM4 474 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PRAMEF7Q5VXH5 474 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 LRRC18Q8N456 261 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 LRRC57Q8N9N7 239 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 IL31RAQ8NI17 732 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PCED1BQ96HM7 432 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 EDF1O60869 148 aaKnown RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PENKP01210 267 aaPredicted RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 HK3P52790 923 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 HSD17B7P56937 341 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PEA15Q15121 130 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 PRICKLE2Q7Z3G6 844 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 GRASPQ7Z6J2 395 aaPredicted RBP12.66□□□□□ -0.38
HIPK3-202ENST00000379016 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
HIPK3-202ENST00000379016 FANCGO15287 622 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 BCKDHBP21953 392 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 GKP32189 559 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 EXOSC2Q13868 293 aaKnown RBP12.65□□□□□ -0.38
HIPK3-202ENST00000379016 GINS1Q14691 196 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF404Q494X3 552 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF648Q5T619 568 aaPredicted RBP12.65□□□□□ -0.38
HIPK3-202ENST00000379016 ARHGAP11AQ6P4F7 1023 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 PAQR3Q6TCH7 311 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF852Q6ZMS4 543 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 AKR1E2Q96JD6 320 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 HSH2DQ96JZ2 352 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 UHRF1Q96T88 793 aaPredicted RBP12.65□□□□□ -0.38
HIPK3-202ENST00000379016 SPATA31A6Q5VVP1 1343 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 HOXD8P13378 290 aaPredicted RBP12.65□□□□□ -0.38
HIPK3-202ENST00000379016 CARM1Q86X55 608 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 PEX11GQ96HA9 241 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 SFXN2Q96NB2 322 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 GPR174Q9BXC1 333 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 CNTRLQ7Z7A1 2325 aa12.65□□□□□ -0.38
HIPK3-202ENST00000379016 SMIM17P0DL12 118 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms